Statistical evaluation of transcriptomic data generated using the Affymetrix one-cycle, two-cycle and IVT-Express RNA labelling protocols with the Arabidopsis ATH1 microarray (Q30000977)

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scientific article (publication date: 15 March 2010)

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English	Statistical evaluation of transcriptomic data generated using the Affymetrix one-cycle, two-cycle and IVT-Express RNA labelling protocols with the Arabidopsis ATH1 microarray	scientific article (publication date: 15 March 2010)

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19 January 2020

Statistical evaluation of transcriptomic data generated using the Affymetrix one-cycle, two-cycle and IVT-Express RNA labelling protocols with the Arabidopsis ATH1 microarray (English)

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19 January 2020

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19 January 2020

Ian Leslie Dryden

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19 January 2020

Charlie Hodgman

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19 January 2020

Michael J Holdsworth

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19 January 2020

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Tara J Holman

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19 January 2020

Kim Kenobi

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19 January 2020

Andrew Ta Wood

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15 March 2010

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19 January 2020

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19 January 2020

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19 January 2020

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Options available for profiling small samples: a review of sample amplification technology when combined with microarray profiling

1 reference

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RNA amplification for successful gene profiling analysis.

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1 reference

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1 reference

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1 reference

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10.1186/1746-4811-6-9

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19 January 2020

Dimensions Publication ID

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9 September 2019

https://scigraph.springernature.com/pub.10.1186/1746-4811-6-9

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19 January 2020

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19 January 2020

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