Single-Molecule Protein Folding Experiments Using High-Precision Optical Tweezers (Q39187447)

9 September 2017

Single-Molecule Protein Folding Experiments Using High-Precision Optical Tweezers (English)

1 reference

9 September 2017

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Junyi Jiao

1 reference

9 September 2017

Aleksander A Rebane

series ordinal

1 reference

9 September 2017

Lu Ma

series ordinal

1 reference

9 September 2017

Yongli Zhang

series ordinal

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9 September 2017

language of work or name

English

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publication date

1 January 2017

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Methods in Molecular Biology

9 September 2017

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9 September 2017

1486

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9 September 2017

357-390

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Structure-Based Derivation of Protein Folding Intermediates and Energies from Optical Tweezers

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Munc18-1-regulated stage-wise SNARE assembly underlying synaptic exocytosis

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Kinetically coupled folding of a single HIV-1 glycoprotein 41 complex in viral membrane fusion and inhibition

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

The nature of protein folding pathways

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Conformational dynamics of single HIV-1 envelope trimers on the surface of native virions

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Structure and immune recognition of trimeric pre-fusion HIV-1 Env.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Common intermediates and kinetics, but different energetics, in the assembly of SNARE proteins

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Energetics of membrane protein folding

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Reconstructing folding energy landscapes by single-molecule force spectroscopy

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

The amyloid state and its association with protein misfolding diseases.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Ultrafast folding kinetics and cooperativity of villin headpiece in single-molecule force spectroscopy.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

High-resolution optical tweezers for single-molecule manipulation

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Force as a single molecule probe of multidimensional protein energy landscapes.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Combined versatile high-resolution optical tweezers and single-molecule fluorescence microscopy

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Energy landscape analysis of native folding of the prion protein yields the diffusion constant, transition path time, and rates

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Single reconstituted neuronal SNARE complexes zipper in three distinct stages

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Click chemistry assisted single-molecule fingerprinting reveals a 3D biomolecular folding funnel

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Calcium-dependent folding of single calmodulin molecules

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Overview of protein folding mechanisms: experimental and theoretical approaches to probing energy landscapes

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Single-molecule observation of helix staggering, sliding, and coiled coil misfolding

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Direct observation of multiple misfolding pathways in a single prion protein molecule

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

The complex folding network of single calmodulin molecules

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Direct quantification of the attempt frequency determining the mechanical unfolding of ubiquitin protein

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Highly anisotropic stability and folding kinetics of a single coiled coil protein under mechanical tension

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

ClpX(P) generates mechanical force to unfold and translocate its protein substrates

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Ultrahigh-resolution optical trap with single-fluorophore sensitivity

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Full distance-resolved folding energy landscape of one single protein molecule

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Helical extension of the neuronal SNARE complex into the membrane

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Reaching the protein folding speed limit with large, sub-microsecond pressure jumps

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Membrane fusion: grappling with SNARE and SM proteins

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Recent advances in optical tweezers

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Interference model for back-focal-plane displacement detection in optical tweezers.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Force unfolding kinetics of RNA using optical tweezers. I. Effects of experimental variables on measured results

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Direct measurement of the full, sequence-dependent folding landscape of a nucleic acid

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Analysis of single-molecule FRET trajectories using hidden Markov modeling

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Differential detection of dual traps improves the spatial resolution of optical tweezers

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Molecular chaperones and protein quality control

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Direct observation of base-pair stepping by RNA polymerase

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Direct observation of the three-state folding of a single protein molecule

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Helix formation via conformation diffusion search

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Dynamic activation of protein function: a view emerging from NMR spectroscopy.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Crystal structure of a SNARE complex involved in synaptic exocytosis at 2.4 A resolution

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Folding-unfolding transitions in single titin molecules characterized with laser tweezers.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Core structure of gp41 from the HIV envelope glycoprotein

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

SNAP receptors implicated in vesicle targeting and fusion

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Entropic elasticity of lambda-phage DNA

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Preventing Alzheimer's disease

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Protein-DNA chimeras for single molecule mechanical folding studies with the optical tweezers

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

The folding cooperativity of a protein is controlled by its chain topology

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Reshaping of the conformational search of a protein by the chaperone trigger factor.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

DNA translocation of ATP-dependent chromatin remodeling factors revealed by high-resolution optical tweezers

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Mechanoenzymatic cleavage of the ultralarge vascular protein von Willebrand factor

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

SNARE assembly and disassembly exhibit a pronounced hysteresis

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Reversible unfolding of single RNA molecules by mechanical force

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

Strategies for site-specific protein biotinylation using in vitro, in vivo and cell-free systems: toward functional protein arrays.

21 August 2018

1 reference

https://api.crossref.org/works/10.1007%2F978-1-4939-6421-5_14

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2F978-1-4939-6421-5_14

A tutorial on hidden Markov models and selected applications in speech recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2F978-1-4939-6421-5_14

Error bounds for convolutional codes and an asymptotically optimum decoding algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2F978-1-4939-6421-5_14

A Maximization Technique Occurring in the Statistical Analysis of Probabilistic Functions of Markov Chains

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2F978-1-4939-6421-5_14

DNA molecular handles for single-molecule protein-folding studies by optical tweezers

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5508109

N- to C-Terminal SNARE Complex Assembly Promotes Rapid Membrane Fusion

4 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27844436

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Ligand exchange during cytochrome c folding

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27844436

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/978-1-4939-6421-5_14

1 reference

9 September 2017

1 reference

9 September 2017

PubMed publication ID

27844436

1 reference