proovread: large-scale high-accuracy PacBio correction through iterative short read consensus (Q38396444)

From Wikidata

Jump to navigation Jump to search

scientific article published on 10 July 2014

edit

Language	Label	Description	Also known as
English	proovread: large-scale high-accuracy PacBio correction through iterative short read consensus	scientific article published on 10 July 2014

Statements

instance of

scholarly article

1 reference

stated in

Europe PubMed Central

PMC publication ID

4609002

retrieved

2 September 2017

title

proovread: large-scale high-accuracy PacBio correction through iterative short read consensus (English)

1 reference

stated in

Europe PubMed Central

PMC publication ID

4609002

retrieved

2 September 2017

author

Frank Förster

object named as

Frank Förster

series ordinal

4

0 references

Rainer Hedrich

object named as

Rainer Hedrich

series ordinal

2

0 references

Thomas Hackl

object named as

Thomas Hackl

series ordinal

1

0 references

Jörg Schultz

series ordinal

3

object named as

Jörg Schultz

1 reference

stated in

Europe PubMed Central

PMC publication ID

4609002

retrieved

2 September 2017

language of work or name

English

0 references

publication date

10 July 2014

1 reference

stated in

Europe PubMed Central

PMC publication ID

4609002

retrieved

2 September 2017

published in

Bioinformatics

1 reference

stated in

Europe PubMed Central

PMC publication ID

4609002

retrieved

2 September 2017

volume

30

1 reference

stated in

Europe PubMed Central

PMC publication ID

4609002

retrieved

2 September 2017

issue

21

1 reference

stated in

Europe PubMed Central

PMC publication ID

4609002

retrieved

2 September 2017

page(s)

3004-3011

1 reference

stated in

Europe PubMed Central

PMC publication ID

4609002

retrieved

2 September 2017

cites work

Microbial phylogenetic profiling with the Pacific Biosciences sequencing platform

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Advantages of Single-Molecule Real-Time Sequencing in High-GC Content Genomes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

The advantages of SMRT sequencing

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Characterizing and measuring bias in sequence data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

PBSIM: PacBio reads simulator--toward accurate genome assembly

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Sequencing the unsequenceable: expanded CGG-repeat alleles of the fragile X gene

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Improving PacBio long read accuracy by short read alignment

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Pacific biosciences sequencing technology for genotyping and variation discovery in human data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Hybrid error correction and de novo assembly of single-molecule sequencing reads

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Fast gapped-read alignment with Bowtie 2

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

SHRiMP2: Sensitive yet Practical Short Read Mapping

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Quake: quality-aware detection and correction of sequencing errors

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

A flexible and efficient template format for circular consensus sequencing and SNP detection

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

De novo assembly of human genomes with massively parallel short read sequencing

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

The Sequence Alignment/Map format and SAMtools

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Real-time DNA sequencing from single polymerase molecules

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

GMAP: a genomic mapping and alignment program for mRNA and EST sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Automated generation of heuristics for biological sequence comparison

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

A whole-genome assembly of Drosophila

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

6 September 2017

Aggressive assembly of pyrosequencing reads with mates

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609002

retrieved

31 August 2018

Identifiers

DOI

10.1093/BIOINFORMATICS/BTU392

1 reference

stated in

Europe PubMed Central

PMC publication ID

4609002

retrieved

2 September 2017

DBLP publication ID

journals/bioinformatics/HacklHSF14

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

PMC publication ID

4609002

1 reference

stated in

Europe PubMed Central

PMC publication ID

4609002

retrieved

2 September 2017

PubMed publication ID

25015988

1 reference

stated in

Europe PubMed Central

PMC publication ID

4609002

retrieved

2 September 2017

ResearchGate publication ID

263860723

0 references

 

Sitelinks

Wikipedia(0 entries)

edit

Wikibooks(0 entries)

edit

Wikinews(0 entries)

edit

Wikiquote(0 entries)

edit

Wikisource(0 entries)

edit

Wikiversity(0 entries)

edit

Wikivoyage(0 entries)

edit

Wiktionary(0 entries)

edit

Multilingual sites(0 entries)

edit

Retrieved from "https://www.wikidata.org/w/index.php?title=Q38396444&oldid=1757632556"