CLIMB (the Cloud Infrastructure for Microbial Bioinformatics): an online resource for the medical microbiology community. (Q38369112)

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English	CLIMB (the Cloud Infrastructure for Microbial Bioinformatics): an online resource for the medical microbiology community.	scientific article

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scholarly article

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stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

title

CLIMB (the Cloud Infrastructure for Microbial Bioinformatics): an online resource for the medical microbiology community (English)

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

main subject

infrastructure

1 reference

based on heuristic

inferred from title

bioinformatics

1 reference

based on heuristic

inferred from title

author

Thomas R. Connor

series ordinal

1

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

author name string

Nicholas J Loman

series ordinal

2

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Simon Thompson

series ordinal

3

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Andy Smith

series ordinal

4

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Joel Southgate

series ordinal

5

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stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Radoslaw Poplawski

series ordinal

6

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Matthew J Bull

series ordinal

7

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Emily Richardson

series ordinal

8

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stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Matthew Ismail

series ordinal

9

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Simon Elwood- Thompson

series ordinal

10

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Christine Kitchen

series ordinal

11

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Martyn Guest

series ordinal

12

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Marius Bakke

series ordinal

13

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Samuel K Sheppard

series ordinal

14

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

Mark J Pallen

series ordinal

15

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

language of work or name

English

1 reference

based on heuristic

inferred from title

publication date

20 September 2016

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

published in

Microbial genomics

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

volume

2

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

issue

9

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

page(s)

e000086

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stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

describes a project that uses

Jupyter notebook file

1 reference

stated in

PubMed Central

cites work

Real-time, portable genome sequencing for Ebola surveillance

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5537631

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6 September 2017

Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5537631

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6 September 2017

Species-wide whole genome sequencing reveals historical global spread and recent local persistence in Shigella flexneri

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5537631

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6 September 2017

Prokka: rapid prokaryotic genome annotation

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5537631

retrieved

6 September 2017

Biology: The big challenges of big data

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5537631

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6 September 2017

The iPlant Collaborative: Cyberinfrastructure for Plant Biology

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5537631

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6 September 2017

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

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6 September 2017

Windshield splatter analysis with the Galaxy metagenomic pipeline

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5537631

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6 September 2017

BEAST: Bayesian evolutionary analysis by sampling trees

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5537631

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6 September 2017

MUSCLE: multiple sequence alignment with high accuracy and high throughput

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5537631

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6 September 2017

Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5537631

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6 September 2017

Twenty years of bacterial genome sequencing

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5537631

retrieved

31 August 2018

Core services: Reward bioinformaticians

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/28785418

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1099/MGEN.0.000086

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

PMC publication ID

5537631

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

PubMed publication ID

28785418

1 reference

stated in

Europe PubMed Central

PMC publication ID

5537631

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28785418%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

 

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