DNA sequence preferences of GAL4 and PPR1: how a subset of Zn2 Cys6 binuclear cluster proteins recognizes DNA. (Q38356138)

2 September 2017

DNA sequence preferences of GAL4 and PPR1: how a subset of Zn2 Cys6 binuclear cluster proteins recognizes DNA. (English)

1 reference

2 September 2017

Liang SD

1 reference

2 September 2017

Marmorstein R

series ordinal

1 reference

2 September 2017

Harrison SC

series ordinal

1 reference

2 September 2017

Ptashne M

series ordinal

1 reference

2 September 2017

language of work or name

English

0 references

publication date

1 July 1996

1 reference

Molecular and Cellular Biology

2 September 2017

1 reference

2 September 2017

1 reference

2 September 2017

1 reference

2 September 2017

3773-3780

1 reference

Wild type GAL4 binds cooperatively to the GAL1-10 UASG in vitro.

2 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Determinants of binding-site specificity among yeast C6 zinc cluster proteins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Crystal structure of a PPR1-DNA complex: DNA recognition by proteins containing a Zn2Cys6 binuclear cluster

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Saccharomyces cerevisiae GAL1-GAL10 divergent promoter region: location and function of the upstream activating sequence UASG.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Transformation of intact yeast cells treated with alkali cations

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

57 Sequencing end-labeled DNA with base-specific chemical cleavages

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Specific DNA binding of GAL4, a positive regulatory protein of yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Rapid and efficient site-specific mutagenesis without phenotypic selection

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Specific protein binding to far upstream activating sequences in polymerase II promoters

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

A new class of yeast transcriptional activators

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Separation of DNA binding from the transcription-activating function of a eukaryotic regulatory protein

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Deletion analysis of GAL4 defines two transcriptional activating segments

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

A GAL family of upstream activating sequences in yeast: roles in both induction and repression of transcription

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

A model fungal gene regulatory mechanism: the GAL genes of Saccharomyces cerevisiae.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

The yeast UASG is a transcriptional enhancer in human HeLa cells in the presence of the GAL4 trans-activator

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

cis- and trans-acting regulatory elements of the yeast URA3 promoter

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

The C6 zinc finger and adjacent amino acids determine DNA-binding specificity and affinity in the yeast activator proteins LAC9 and PPR1.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Identification of base and backbone contacts used for DNA sequence recognition and high-affinity binding by LAC9, a transcription activator containing a C6 zinc finger

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

A structural taxonomy of DNA-binding domains

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

DNA recognition by GAL4: structure of a protein-DNA complex.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

DNA sequencing with chain-terminating inhibitors

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Altering DNA-binding specificity of GAL4 requires sequences adjacent to the zinc finger

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Facilitated binding of GAL4 and heat shock factor to nucleosomal templates: differential function of DNA-binding domains

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Solution structure of the DNA-binding domain of Cd2-GAL4 from S. cerevisiae

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

An amino-terminal fragment of GAL4 binds DNA as a dimer

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Structure of the DNA-binding domain of zinc GAL4

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=231373

Contact with a component of the polymerase II holoenzyme suffices for gene activation

3 December 2018

1 reference

12 December 2020

Effect of non-contacted bases on the affinity of 434 operator for 434 repressor and Cro

1 reference

12 December 2020

Transcription in yeast activated by a putative amphipathic α helix linked to a DNA binding unit

1 reference

12 December 2020

GAL11P: a yeast mutation that potentiates the effect of weak GAL4-derived activators

1 reference

12 December 2020

GAL4 fusion vectors for expression in yeast or mammalian cells

1 reference

12 December 2020

How do "Zn2 cys6" proteins distinguish between similar upstream activation sites? Comparison of the DNA-binding specificity of the GAL4 protein in vitro and in vivo

1 reference

12 December 2020

Identifiers

DOI

10.1128/MCB.16.7.3773

1 reference

release_yjysghjlpzduha6blbipbljdtu

2 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/yjysghjlpzduha6blbipbljdtu

24 November 2022

mapped directly with Wikidata item

1 reference

2 September 2017

PubMed publication ID

8668194

1 reference