RNA accessibility prediction: a theoretical approach is consistent with experimental studies in cell extracts (Q38311071)

2 September 2017

RNA accessibility prediction: a theoretical approach is consistent with experimental studies in cell extracts (English)

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2 September 2017

M Scherr

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2 September 2017

J J Rossi

series ordinal

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2 September 2017

G Sczakiel

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2 September 2017

V Patzel

series ordinal

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2 September 2017

language of work or name

English

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publication date

1 July 2000

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2 September 2017

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inferred from page(s)

published in

Nucleic Acids Research

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2 September 2017

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2 September 2017

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2 September 2017

2455-2461

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Rapid determination and quantitation of the accessibility to native RNAs by antisense oligodeoxynucleotides in murine cell extracts

2 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

A rapid in vitro method for obtaining RNA accessibility patterns for complementary DNA probes: correlation with an intracellular pattern and known RNA structures

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Selecting effective antisense reagents on combinatorial oligonucleotide arrays

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Protein Enhancement of Hammerhead Ribozyme Catalysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Inhibition of viral growth by antisense oligonucleotides directed against the IE110 and the UL30 mRNA of herpes simplex virus type-1.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Selection of efficient cleavage sites in target RNAs by using a ribozyme expression library

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

RNA annealing activities in HeLa nuclei.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

A theoretical approach to select effective antisense oligodeoxyribonucleotides at high statistical probability

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Dissociation of long-chain duplex RNA can occur via strand displacement in vitro: biological implications

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

The potential of ribozymes as antiviral agents

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Controlled, targeted, intracellular expression of ribozymes: progress and problems

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Antisense oligonucleotides as therapeutic agents--is the bullet really magical?

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Probing accessible sites for ribozymes on human acetylcholinesterase RNA.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Kinetics of renaturation of DNA

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Mechanistic insights into p53-promoted RNA-RNA annealing.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Antitumor activity of a phosphorothioate antisense oligodeoxynucleotide targeted against C-raf kinase

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Design of hammerhead ribozymes for the inhibition of gene expression ex vivo by exogenous application.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Gene inhibition using antisense oligodeoxynucleotides

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102709

Kinetics of renaturation of denatured DNA. I. Spectrophotometric results

31 August 2018

1 reference

12 December 2020

Combinatorial screening and rational optimization for hybridization to folded hepatitis C virus RNA of oligonucleotides with biological antisense activity

1 reference

12 December 2020

Specific hammerhead ribozyme-mediated cleavage of mutant N-ras mRNA in vitro and ex vivo. Oligoribonucleotides as therapeutic agents

1 reference

12 December 2020

Mapping of RNA accessible sites for antisense experiments with oligonucleotide libraries

1 reference

12 December 2020

Theoretical design of antisense RNA structures substantially improves annealing kinetics and efficacy in human cells

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/28.13.2455

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2 September 2017

journals/nar/ScherrRSP00

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DBLP Dataset 2021-01-02

28 January 2021

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2 September 2017

PubMed publication ID

10871393

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