Using FlyBase, a Database of Drosophila Genes and Genomes. (Q37411341)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27730573%20AND%20SRC:MED&resulttype=core&format=json

25 March 2020

review article

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title

Using FlyBase, a Database of Drosophila Genes and Genomes (English)

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25 March 2020

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0 references

1 reference

FlyBase

27 July 2023

1 reference

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25 March 2020

Madeline A Crosby

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25 March 2020

Joshua L Goodman

series ordinal

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25 March 2020

FlyBase Consortium

series ordinal

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25 March 2020

language of work or name

English

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publication date

1 January 2016

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Methods in Molecular Biology

25 March 2020

number of pages

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based on heuristic

inferred from page(s)

published in

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25 March 2020

volume

1478

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25 March 2020

page(s)

1-31

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FlyBase portals to human disease research using Drosophila models

25 March 2020

cites work

1 reference

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FlyBase: establishing a Gene Group resource for Drosophila melanogaster

6 September 2017

1 reference

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Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

6 September 2017

1 reference

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Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

6 September 2017

1 reference

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The Release 6 reference sequence of the Drosophila melanogaster genome.

6 September 2017

1 reference

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The BioGRID interaction database: 2015 update

6 September 2017

1 reference

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OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software

6 September 2017

1 reference

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FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations

6 September 2017

1 reference

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Genenames.org: the HGNC resources in 2015

6 September 2017

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6 September 2017

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Disease Ontology 2015 update: an expanded and updated database of human diseases for linking biomedical knowledge through disease data

6 September 2017

1 reference

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esyN: network building, sharing and publishing

6 September 2017

1 reference

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Resources for functional genomics studies in Drosophila melanogaster

6 September 2017

1 reference

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FlyBase 102--advanced approaches to interrogating FlyBase

6 September 2017

1 reference

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WormBase 2014: new views of curated biology

6 September 2017

1 reference

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The Drosophila anatomy ontology

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

The Drosophila phenotype ontology

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

The Hippo signaling pathway interactome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

Sequencing mRNA from cryo-sliced Drosophila embryos to determine genome-wide spatial patterns of gene expression

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

An extracellular interactome of immunoglobulin and LRR proteins reveals receptor-ligand networks.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

Using GBrowse 2.0 to visualize and share next-generation sequence data

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

FlyAtlas: database of gene expression in the tissues of Drosophila melanogaster.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

FlyBase: improvements to the bibliography

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

A GAL4-driver line resource for Drosophila neurobiology

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

FACS purification and transcriptome analysis of drosophila neural stem cells reveals a role for Klumpfuss in self-renewal

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

Directly e-mailing authors of newly published papers encourages community curation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

The Drosophila melanogaster Genetic Reference Panel

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

FlyBase 101--the basics of navigating FlyBase

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

FlyRNAi.org--the database of the Drosophila RNAi screening center: 2012 update

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

A protein complex network of Drosophila melanogaster

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

FlyExpress: visual mining of spatiotemporal patterns for genes and publications in Drosophila embryogenesis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

An integrative approach to ortholog prediction for disease-focused and other functional studies

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

The developmental transcriptome of Drosophila melanogaster

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

Identification of functional elements and regulatory circuits by Drosophila modENCODE

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

The Drosophila melanogaster transcriptome by paired-end RNA sequencing

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

DroID 2011: a comprehensive, integrated resource for protein, transcription factor, RNA and gene interactions for Drosophila

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

A New Resource for CharacterizingX-Linked Genes inDrosophila melanogaster: Systematic Coverage and Subdivision of theXChromosome With Nested,Y-Linked Duplications

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

Building and analyzing protein interactome networks by cross-species comparisons

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

FlyBase: enhancing Drosophila Gene Ontology annotations

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

FlyBase : a database for the Drosophila research community

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

Tools for neuroanatomy and neurogenetics in Drosophila

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

Mapping and quantifying mammalian transcriptomes by RNA-Seq

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

FlyBase: integration and improvements to query tools

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

Evolution of genes and genomes on the Drosophila phylogeny

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

Systematic determination of patterns of gene expression during Drosophila embryogenesis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

Genome-scale functional characterization of Drosophila developmental enhancers in vivo

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

SEX LIMITED INHERITANCE IN DROSOPHILA.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5107610

10.1007/978-1-4939-6371-3_1

2 September 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27730573%20AND%20SRC:MED&resulttype=core&format=json

25 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27730573%20AND%20SRC:MED&resulttype=core&format=json

25 March 2020

PubMed publication ID

27730573

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27730573%20AND%20SRC:MED&resulttype=core&format=json