Direct observation of hierarchical folding in single riboswitch aptamers (Q37094143)

18 August 2017

Direct observation of hierarchical folding in single riboswitch aptamers (English)

1 reference

18 August 2017

William J Greenleaf

1 reference

18 August 2017

Steven M Block

1 reference

18 August 2017

Kirsten L Frieda

1 reference

18 August 2017

Daniel A N Foster

series ordinal

1 reference

18 August 2017

Michael T Woodside

series ordinal

1 reference

18 August 2017

language of work or name

English

0 references

publication date

3 January 2008

1 reference

18 August 2017

1 reference

18 August 2017

319

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18 August 2017

5863

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18 August 2017

630-633

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Ligand-induced folding of the guanine-sensing riboswitch is controlled by a combined predetermined induced fit mechanism

18 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

The intricate world of riboswitches

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Interplay of 'induced fit' and preorganization in the ligand induced folding of the aptamer domain of the guanine binding riboswitch

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Direct measurement of the full, sequence-dependent folding landscape of a nucleic acid

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Unusual mechanical stability of a minimal RNA kissing complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Folding of the adenine riboswitch

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Thermodynamic and kinetic characterization of ligand binding to the purine riboswitch aptamer domain

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Nanomechanical measurements of the sequence-dependent folding landscapes of single nucleic acid hairpins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Direct observation of base-pair stepping by RNA polymerase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Regulation of bacterial gene expression by riboswitches

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

An intermolecular base triple as the basis of ligand specificity and affinity in the guanine- and adenine-sensing riboswitch RNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Structural basis for discriminative regulation of gene expression by adenine- and guanine-sensing mRNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Structure of a natural guanine-responsive riboswitch complexed with the metabolite hypoxanthine

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Adenine riboswitches and gene activation by disruption of a transcription terminator

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Identifying kinetic barriers to mechanical unfolding of the T. thermophila ribozyme

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

The effect of force on thermodynamics and kinetics of single molecule reactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Pulling on the nascent RNA during transcription does not alter kinetics of elongation or ubiquitous pausing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Intrinsic rates and activation free energies from single-molecule pulling experiments.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Passive all-optical force clamp for high-resolution laser trapping

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

The kinetics of ligand binding by an adenine-sensing riboswitch

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Equilibrium information from nonequilibrium measurements in an experimental test of Jarzynski's equality

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640945

Decreased resistance to bacterial infection and granulocyte defects in IAP-deficient mice.

3 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1126%2FSCIENCE.1151298

Nonequilibrium Equality for Free Energy Differences

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1126%2FSCIENCE.1151298

The Speed of RNA Transcription and Metabolite Binding Kinetics Operate an FMN Riboswitch

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1126%2FSCIENCE.1151298

Elastic properties of a single-stranded charged homopolymeric ribonucleotide

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18174398

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1126/SCIENCE.1151298

1 reference

18 August 2017

1 reference

18 August 2017

PubMed publication ID

18174398

1 reference