Early de novo DNA methylation and prolonged demethylation in the muscle lineage. (Q36891931)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23417056%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

title

Early de novo DNA methylation and prolonged demethylation in the muscle lineage (English)

1 reference

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24 February 2020

0 references

1 reference

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24 February 2020

1 reference

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24 February 2020

1 reference

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24 February 2020

Lingyun Song

1 reference

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24 February 2020

Koji Tsumagari

1 reference

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24 February 2020

Carl Baribault

1 reference

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24 February 2020

Jolyon Terragni

1 reference

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24 February 2020

Sirharsa Pradhan

1 reference

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24 February 2020

Melody Badoo

1 reference

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24 February 2020

Charlene M Crain

1 reference

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24 February 2020

Richard M Myers

1 reference

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24 February 2020

Melanie Ehrlich

1 reference

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24 February 2020

Gregory E Crawford

1 reference

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24 February 2020

publication date

15 February 2013

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24 February 2020

1 reference

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24 February 2020

volume

1 reference

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24 February 2020

issue

1 reference

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24 February 2020

page(s)

317-332

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23417056%20AND%20SRC:MED&resulttype=core&format=json

DNA methylation plasticity of human adipose-derived stem cells in lineage commitment

24 February 2020

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29 September 2017

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Deciphering transcription dysregulation in FSH muscular dystrophy.

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Biallelic expression of Tbx1 protects the embryo from developmental defects caused by increased receptor tyrosine kinase signaling

29 September 2017

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Hydroxylation of 5-methylcytosine by TET2 maintains the active state of the mammalian HOXA cluster

29 September 2017

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Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

29 September 2017

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Sim2 prevents entry into the myogenic program by repressing MyoD transcription during limb embryonic myogenesis.

29 September 2017

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Acute exercise remodels promoter methylation in human skeletal muscle.

29 September 2017

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Parallel mechanisms of epigenetic reprogramming in the germline

29 September 2017

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Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

29 September 2017

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Tbx1 is a negative modulator of Mef2c

29 September 2017

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Recognition and potential mechanisms for replication and erasure of cytosine hydroxymethylation

29 September 2017

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Thymine DNA glycosylase specifically recognizes 5-carboxylcytosine-modified DNA

29 September 2017

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Understanding the language of Lys36 methylation at histone H3.

29 September 2017

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Biochemical characterization of recombinant β-glucosyltransferase and analysis of global 5-hydroxymethylcytosine in unique genomes

29 September 2017

1 reference

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Detecting 22q11.2 deletion in Chinese children with conotruncal heart defects and single nucleotide polymorphisms in the haploid TBX1 locus

29 September 2017

1 reference

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Uncovering the role of 5-hydroxymethylcytosine in the epigenome

29 September 2017

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5-Hydroxymethylcytosine is strongly depleted in human cancers but its levels do not correlate with IDH1 mutations

29 September 2017

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DNA methylation profiling of embryonic stem cell differentiation into the three germ layers

29 September 2017

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CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing

29 September 2017

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29 September 2017

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Analysis of DNA methylation in a three-generation family reveals widespread genetic influence on epigenetic regulation.

29 September 2017

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H3K4 tri-methylation provides an epigenetic signature of active enhancers

29 September 2017

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Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA

29 September 2017

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Emerging roles of TET proteins and 5-hydroxymethylcytosines in active DNA demethylation and beyond

29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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Thymine DNA glycosylase is essential for active DNA demethylation by linked deamination-base excision repair

29 September 2017

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Chromosome-wide DNA methylation analysis predicts human tissue-specific X inactivation

29 September 2017

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Elevated miR-499 levels blunt the cardiac stress response

29 September 2017

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Extensive epigenetic reprogramming in human somatic tissues between fetus and adult

29 September 2017

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Mechanisms of T-box gene function in the developing heart

29 September 2017

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Exposing the DNA methylome iceberg

29 September 2017

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Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain

29 September 2017

1 reference

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Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation

29 September 2017

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Mapping and analysis of chromatin state dynamics in nine human cell types

29 September 2017

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Genomic mapping of 5-hydroxymethylcytosine in the human brain

29 September 2017

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Molecular coupling of DNA methylation and histone methylation

29 September 2017

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Regulation of synapse structure and function by distinct myosin II motors

29 September 2017

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Tissue distribution of 5-hydroxymethylcytosine and search for active demethylation intermediates

29 September 2017

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Bmp signaling regulates myocardial differentiation from cardiac progenitors through a MicroRNA-mediated mechanism

29 September 2017

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Early demethylation of non-CpG, CpC-rich, elements in the myogenin 5'-flanking region: a priming effect on the spreading of active demethylation.

29 September 2017

1 reference

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CpG island clusters and pro-epigenetic selection for CpGs in protein-coding exons of HOX and other transcription factors

29 September 2017

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

29 September 2017

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GREAT improves functional interpretation of cis-regulatory regions

29 September 2017

1 reference

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The embryonic genes Dkk3, Hoxd8, Hoxd9 and Tbx1 identify muscle types in a diet-independent and fiber-type unrelated way.

29 September 2017

1 reference

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Uncoupling of expression of an intronic microRNA and its myosin host gene by exon skipping

29 September 2017

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29 September 2017

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Muscle stem cells in developmental and regenerative myogenesis

29 September 2017

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Distinct enhancers at the Pax3 locus can function redundantly to regulate neural tube and neural crest expressions

29 September 2017

1 reference

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A family of microRNAs encoded by myosin genes governs myosin expression and muscle performance

29 September 2017

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29 September 2017

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Muscle giants: molecular scaffolds in sarcomerogenesis

29 September 2017

1 reference

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The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

29 September 2017

1 reference

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Integrated functions of Pax3 and Pax7 in the regulation of proliferation, cell size and myogenic differentiation

29 September 2017

1 reference

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CCCTC-binding factor: to loop or to bridge

29 September 2017

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Genome-scale DNA methylation maps of pluripotent and differentiated cells

29 September 2017

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

29 September 2017

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Characterization of Ayu17-449 gene expression and resultant kidney pathology in a knockout mouse model

29 September 2017

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High-resolution mapping and characterization of open chromatin across the genome

29 September 2017

1 reference

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Tbx1 haploinsufficiency is linked to behavioral disorders in mice and humans: implications for 22q11 deletion syndrome

29 September 2017

1 reference

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Identification of minimal enhancer elements sufficient for Pax3 expression in neural crest and implication of Tead2 as a regulator of Pax3

29 September 2017

1 reference

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LCX, leukemia-associated protein with a CXXC domain, is fused to MLL in acute myeloid leukemia with trilineage dysplasia having t(10;11)(q22;q23).

29 September 2017

1 reference

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Identification, tissue expression and chromosomal localization of human Obscurin-MLCK, a member of the titin and Dbl families of myosin light chain kinases

29 September 2017

1 reference

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Obscurin, a giant sarcomeric Rho guanine nucleotide exchange factor protein involved in sarcomere assembly

29 September 2017

1 reference

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Isolation and characterization of a gene from the DiGeorge chromosomal region homologous to the mouse Tbx1 gene

29 September 2017

1 reference

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MyoD1 promoter autoregulation is mediated by two proximal E-boxes

29 September 2017

1 reference

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Isolation of two isoforms of the PAX3 gene transcripts and their tissue-specific alternative expression in human adult tissues

29 September 2017

1 reference

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Amount and distribution of 5-methylcytosine in human DNA from different types of tissues of cells

29 September 2017

1 reference

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Manipulation of endogenous regulatory elements and transgenic analyses of the Tbx1 gene.

29 September 2017

1 reference

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Tbx1 regulation of myogenic differentiation in the limb and cranial mesoderm

4 September 2018

1 reference

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Gene expression analyses reveal molecular relationships among 20 regions of the human CNS.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3669123

A user's guide to the encyclopedia of DNA elements (ENCODE)

4 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.4161%2FEPI.23989

Identification of a hypaxial somite enhancer element regulating Pax3 expression in migrating myoblasts and characterization of hypaxial muscle Cre transgenic mice

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23417056

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DNA methylation profiling of pseudogene-parental gene pairs and two gene families

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23417056

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.4161/EPI.23989

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23417056%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23417056%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

PubMed publication ID

23417056

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23417056%20AND%20SRC:MED&resulttype=core&format=json