The piRNA pathway in flies: highlights and future directions. (Q36753661)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23317515%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

review article

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title

The piRNA pathway in flies: highlights and future directions (English)

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22 February 2020

1 reference

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22 February 2020

Gregory J Hannon

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22 February 2020

Paloma M Guzzardo

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22 February 2020

publication date

11 January 2013

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Current Opinion in Genetics & Development

22 February 2020

published in

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22 February 2020

volume

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22 February 2020

issue

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22 February 2020

page(s)

44-52

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Transcriptional silencing of transposons by Piwi and maelstrom and its impact on chromatin state and gene expression

22 February 2020

cites work

1 reference

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UAP56 couples piRNA clusters to the perinuclear transposon silencing machinery

29 September 2017

1 reference

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Biology of PIWI-interacting RNAs: new insights into biogenesis and function inside and outside of germlines

29 September 2017

1 reference

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Structure and function of Zucchini endoribonuclease in piRNA biogenesis

29 September 2017

1 reference

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The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis

29 September 2017

1 reference

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A role for Fkbp6 and the chaperone machinery in piRNA amplification and transposon silencing

29 September 2017

1 reference

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The cochaperone shutdown defines a group of biogenesis factors essential for all piRNA populations in Drosophila

29 September 2017

1 reference

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shutdown is a component of the Drosophila piRNA biogenesis machinery.

29 September 2017

1 reference

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piRNA-mediated transgenerational inheritance of an acquired trait

29 September 2017

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Adaptation to P element transposon invasion in Drosophila melanogaster

29 September 2017

1 reference

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Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line

29 September 2017

1 reference

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Production of artificial piRNAs in flies and mice

29 September 2017

1 reference

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Separation of stem cell maintenance and transposon silencing functions of Piwi protein

29 September 2017

1 reference

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The Cutoff protein regulates piRNA cluster expression and piRNA production in the Drosophila germline

29 September 2017

1 reference

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3' end formation of PIWI-interacting RNAs in vitro

29 September 2017

1 reference

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A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors

29 September 2017

1 reference

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Dynamic interactions between transposable elements and their hosts

29 September 2017

1 reference

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Vreteno, a gonad-specific protein, is essential for germline development and primary piRNA biogenesis in Drosophila

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

piRNA production requires heterochromatin formation in Drosophila

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Mitochondria in innate immunity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Mechanism of the piRNA-mediated silencing of Drosophila telomeric retrotransposons.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

PIWI-interacting small RNAs: the vanguard of genome defence

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

piRNA-Associated Germline Nuage Formation and Spermatogenesis Require MitoPLD Profusogenic Mitochondrial-Surface Lipid Signaling

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

MITOPLD is a mitochondrial protein essential for nuage formation and piRNA biogenesis in the mouse germline

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Roles for the Yb body components Armitage and Yb in primary piRNA biogenesis in Drosophila

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

A broadly conserved pathway generates 3'UTR-directed primary piRNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila.

29 September 2017

1 reference

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The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line

29 September 2017

1 reference

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The Yb protein defines a novel organelle and regulates male germline stem cell self-renewal in Drosophila melanogaster

29 September 2017

1 reference

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Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary

29 September 2017

1 reference

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Collapse of Germline piRNAs in the Absence of Argonaute3 Reveals Somatic piRNAs in Flies

29 September 2017

1 reference

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Small RNAs as guardians of the genome

29 September 2017

1 reference

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An epigenetic role for maternally inherited piRNAs in transposon silencing

29 September 2017

1 reference

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Small RNA-directed heterochromatin formation in the context of development: what flies might learn from fission yeast

29 September 2017

1 reference

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Small RNA guides for de novo DNA methylation in mammalian germ cells

29 September 2017

1 reference

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Drosophila PIWI associates with chromatin and interacts directly with HP1a

29 September 2017

1 reference

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Repeat-associated siRNAs cause chromatin silencing of retrotransposons in the Drosophila melanogaster germline

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Pimet, the Drosophila homolog of HEN1, mediates 2'-O-methylation of Piwi- interacting RNAs at their 3' ends

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

The Drosophila RNA methyltransferase, DmHen1, modifies germline piRNAs and single-stranded siRNAs in RISC.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Developmentally regulated piRNA clusters implicate MILI in transposon control

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Unique germ-line organelle, nuage, functions to repress selfish genetic elements in Drosophila melanogaster

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Element 1360 and RNAi components contribute to HP1-dependent silencing of a pericentric reporter

29 September 2017

1 reference

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Establishment of stable cell lines of Drosophila germ-line stem cells

29 September 2017

1 reference

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The role of PIWI and the miRNA machinery in Drosophila germline determination.

29 September 2017

1 reference

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Heterochromatic silencing and HP1 localization in Drosophila are dependent on the RNAi machinery

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Characterization of the flamenco region of the Drosophila melanogaster genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

piwi encodes a nucleoplasmic factor whose activity modulates the number and division rate of germline stem cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Paramutation in Drosophila linked to emergence of a piRNA-producing locus.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Maelstrom, a Drosophila spindle-class gene, encodes a protein that colocalizes with Vasa and RDE1/AGO1 homolog, Aubergine, in nuage

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Aubergine encodes a Drosophila polar granule component required for pole cell formation and related to eIF2C.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

Expression of the Drosophila retrovirus gypsy as ultrastructurally detectable particles in the ovaries of flies carrying a permissive flamenco allele

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621807

10.1016/J.GDE.2012.12.003

5 September 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23317515%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23317515%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

PubMed publication ID

23317515

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23317515%20AND%20SRC:MED&resulttype=core&format=json