A zinc finger directory for high-affinity DNA recognition (Q36684483)

15 August 2017

A zinc finger directory for high-affinity DNA recognition (English)

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15 August 2017

Jamieson AC

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15 August 2017

Wang H

series ordinal

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15 August 2017

Kim SH

series ordinal

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15 August 2017

language of work or name

English

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publication date

1 November 1996

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Proceedings of the National Academy of Sciences of the United States of America

15 August 2017

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inferred from page(s)

published in

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15 August 2017

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15 August 2017

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15 August 2017

12834-12839

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Recognition of diverse sequences by class I zinc fingers: asymmetries and indirect effects on specificity in the interaction between CF2II and A+T-rich elements

15 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Intercalation, DNA kinking, and the control of transcription.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Use of a zinc-finger consensus sequence framework and specificity rules to design specific DNA binding proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

A role in DNA binding for the linker sequences of the first three zinc fingers of TFIIIA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Zinc finger phage: affinity selection of fingers with new DNA-binding specificities

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

The crystal structure of a two zinc-finger peptide reveals an extension to the rules for zinc-finger/DNA recognition

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

In vitro selection of zinc fingers with altered DNA-binding specificity

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Distinctive DNA conformation with enlarged major groove is found in Zn-finger-DNA and other protein-DNA complexes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Selection of DNA binding sites for zinc fingers using rationally randomized DNA reveals coded interactions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Toward a code for the interactions of zinc fingers with DNA: selection of randomized fingers displayed on phage

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Length-encoded multiplex binding site determination: application to zinc finger proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Repetitive zinc-binding domains in the protein transcription factor IIIA from Xenopus oocytes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

A gene activated in mouse 3T3 cells by serum growth factors encodes a protein with "zinc finger" sequences

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Two zinc fingers of a yeast regulatory protein shown by genetic evidence to be essential for its function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

The DNA binding site of the Xenopus transcription factor IIIA has a non-B-form structure

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Sequence-specific DNA-binding activities of the gap proteins encoded by hunchback and Krüppel in Drosophila

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Three-dimensional solution structure of a single zinc finger DNA-binding domain

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

High-resolution three-dimensional structure of a single zinc finger from a human enhancer binding protein in solution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Zinc Finger Domains: Hypotheses and Current Knowledge

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

The tramtrack gene encodes a Drosophila finger protein that interacts with the ftz transcriptional regulatory region and shows a novel embryonic expression pattern

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Zinc finger-DNA recognition: crystal structure of a Zif268-DNA complex at 2.1 A

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Efficient site-directed mutagenesis using uracil-containing DNA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Alanine scanning site-directed mutagenesis of the zinc fingers of transcription factor ADR1: residues that contact DNA and that transactivate

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Zinc finger-DNA recognition: analysis of base specificity by site-directed mutagenesis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Toward rules relating zinc finger protein sequences and DNA binding site preferences

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Sp1 and the subfamily of zinc finger proteins with guanine-rich binding sites

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Sequence-specific recognition of double helical nucleic acids by proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Determination of the base recognition positions of zinc fingers from sequence analysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

RNA and DNA binding zinc fingers in Xenopus TFIIIA.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=24006

Molecular basis for specific recognition of both RNA and DNA by a zinc finger protein

28 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.93.23.12834

The solution structure of the human ETS1-DNA complex reveals a novel mode of binding and true side chain intercalation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.93.23.12834

Solution structure of a zinc finger domain of yeast ADR1

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.93.23.12834

Specific DNA-RNA hybrid binding by zinc finger proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.93.23.12834

Structure-based design of transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.93.23.12834

21 January 2018

Identifiers

DOI

10.1073/PNAS.93.23.12834

1 reference

15 August 2017

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1 reference

15 August 2017

PubMed publication ID

8917505

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