Utility of correlation measures in analysis of gene expression (Q36525179)

14 August 2017

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title

Utility of correlation measures in analysis of gene expression (English)

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14 August 2017

Anthony Almudevar

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14 August 2017

Lev B Klebanov

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14 August 2017

Xing Qiu

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14 August 2017

Peter Salzman

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14 August 2017

Andrei Y Yakovlev

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14 August 2017

1 July 2006

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14 August 2017

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14 August 2017

1 reference

14 August 2017

1 reference

14 August 2017

384-395

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The L1-version of the Cramér-von Mises test for two-sample comparisons in microarray data analysis

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

The cognitive phenotype of Down syndrome: insights from intracellular network analysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Microarrays in Parkinson's disease: a systematic approach

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Single cell gene expression profiling in Alzheimer's disease

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

A new type of stochastic dependence revealed in gene expression data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Generalized rank tests for replicated microarray data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Assessing stability of gene selection in microarray data analysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Searching for differentially expressed gene combinations

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Discovering statistically significant pathways in expression profiling studies

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

The effects of normalization on the correlation structure of microarray data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Multivariate search for differentially expressed gene combinations

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Discovery of meaningful associations in genomic data using partial correlation coefficients

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Inferring cellular networks using probabilistic graphical models

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

A global test for groups of genes: testing association with a clinical outcome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

A statistical problem for inference to regulatory structure from associations of gene expression measurements with microarrays

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Transitive functional annotation by shortest-path analysis of gene expression data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Assessing gene significance from cDNA microarray expression data via mixed models

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Using Bayesian networks to analyze expression data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Discovering functional relationships between RNA expression and chemotherapeutic susceptibility using relevance networks

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Importance of replication in microarray gene expression studies: statistical methods and evidence from repetitive cDNA hybridizations

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Mutual information relevance networks: functional genomic clustering using pairwise entropy measurements

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Cluster analysis and display of genome-wide expression patterns

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Hotelling's T2 multivariate profiling for detecting differential expression in microarrays.

30 September 2017

1 reference

https://api.crossref.org/works/10.1016%2FJ.NURX.2006.05.037

The effect of replication on gene expression microarray experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.NURX.2006.05.037

An empirical Bayes approach to inferring large-scale gene association networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.NURX.2006.05.037

Single cell resolution in regulation of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.NURX.2006.05.037

Reverse engineering gene regulatory networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.NURX.2006.05.037

Low-order conditional independence graphs for inferring genetic networks.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3593386

Being Bayesian About Network Structure. A Bayesian Approach to Structure Discovery in Bayesian Networks

21 September 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.NURX.2006.05.037

Correlation between gene expression levels and limitations of the empirical bayes methodology for finding differentially expressed genes

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16815221

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Improved gene selection for classification of microarrays

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16815221

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.NURX.2006.05.037

1 reference

14 August 2017

1 reference

14 August 2017

PubMed publication ID

16815221

1 reference