Gene network inference via structural equation modeling in genetical genomics experiments (Q36515885)

14 August 2017

Gene network inference via structural equation modeling in genetical genomics experiments (English)

1 reference

structural equation modeling

14 August 2017

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1 reference

Bing Liu

1 reference

14 August 2017

Alberto de la Fuente

series ordinal

1 reference

14 August 2017

Ina Hoeschele

series ordinal

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14 August 2017

language of work or name

English

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publication date

3 February 2008

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14 August 2017

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inferred from page(s)

published in

Genetics

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14 August 2017

178

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14 August 2017

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14 August 2017

1763-1776

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Reconstructing gene regulatory networks with bayesian networks by combining expression data with multiple sources of prior knowledge

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Genetical genomics: use all data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Structural model analysis of multiple quantitative traits

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Causal inference of regulator-target pairs by gene mapping of expression phenotypes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Reconstruction of a functional human gene network, with an application for prioritizing positional candidate genes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Combining microarrays and biological knowledge for estimating gene networks via Bayesian networks.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Cis-acting expression quantitative trait loci in mice

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Informative structure priors: joint learning of dynamic regulatory networks from multiple types of data.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

The landscape of genetic complexity across 5,700 gene expression traits in yeast

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Regulating gene expression: surprises still in store

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Identification of genetic networks

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Structural equation model-based genome scan for the metabolic syndrome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Parameter estimation in biochemical pathways: a comparison of global optimization methods

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Artificial gene networks for objective comparison of analysis algorithms

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Pleiotropy, homeostasis, and functional networks based on assays of cardiovascular traits in genetically randomized populations

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Gene networks: how to put the function in genomics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Transcriptional regulatory networks in Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Discovery of causal relationships in a gene-regulation pathway from a mixture of experimental and observational DNA microarray data.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Combining location and expression data for principled discovery of genetic regulatory network models

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Using Bayesian networks to analyze expression data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

GEPASI: a software package for modelling the dynamics, steady states and control of biochemical and other systems

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Multiple trait analysis of genetic mapping for quantitative trait loci

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

An integrative approach for causal gene identification and gene regulatory pathway inference

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Elucidating the murine brain transcriptional network in a segregating mouse population to identify core functional modules for obesity and diabetes

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Bayesian network and nonparametric heteroscedastic regression for nonlinear modeling of genetic network.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

An integrative genomics approach to the reconstruction of gene networks in segregating populations.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Studying complex biological systems using multifactorial perturbation.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Inferring subnetworks from perturbed expression profiles

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Genetical genomics: the added value from segregation.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Inferring gene transcriptional modulatory relations: a genetical genomics approach

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278111

Biochemistry by numbers: simulation of biochemical pathways with Gepasi 3

4 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18245846

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genetics of colitis susceptibility in IL-10-deficient mice: backcross versus F2 results contrasted by principal component analysis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18245846

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factors

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18245846

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1534/GENETICS.107.080069

1 reference

14 August 2017

1 reference

14 August 2017

PubMed publication ID

18245846

1 reference