Characterization of the fast dynamics of protein amino acid side chains using NMR relaxation in solution (Q36472769)

14 August 2017

1 reference

title

Characterization of the fast dynamics of protein amino acid side chains using NMR relaxation in solution (English)

1 reference

14 August 2017

A Joshua Wand

1 reference

14 August 2017

Tatyana I Igumenova

1 reference

PMC publication ID

2547146

14 August 2017

Kendra King Frederick

series ordinal

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14 August 2017

1 May 2006

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14 August 2017

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14 August 2017

106

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14 August 2017

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14 August 2017

1672-1699

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NMR residual dipolar couplings as probes of biomolecular dynamics

14 August 2017

1 reference

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Characterization of the dynamics of biomacromolecules using rotating-frame spin relaxation NMR spectroscopy

30 September 2017

1 reference

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Optimal isotope labelling for NMR protein structure determinations.

30 September 2017

1 reference

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Ensemble-based signatures of energy propagation in proteins: a new view of an old phenomenon.

30 September 2017

1 reference

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Methyl groups as probes of structure and dynamics in NMR studies of high-molecular-weight proteins

30 September 2017

1 reference

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What contributions to protein side-chain dynamics are probed by NMR experiments? A molecular dynamics simulation analysis

30 September 2017

1 reference

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NMR studies of protein structure and dynamics

30 September 2017

1 reference

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NMR dynamics-derived insights into the binding properties of a peptide interacting with an SH2 domain

30 September 2017

1 reference

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Correlation between 2H NMR side-chain order parameters and sequence conservation in globular proteins

30 September 2017

1 reference

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Prediction of methyl-side chain dynamics in proteins.

30 September 2017

1 reference

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The origin of protein sidechain order parameter distributions

30 September 2017

1 reference

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The response of internal dynamics to hydrophobic core mutations in the SH3 domain from the Fyn tyrosine kinase

30 September 2017

1 reference

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Ligand-dependent dynamics and intramolecular signaling in a PDZ domain

30 September 2017

1 reference

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Allosteric determinants in guanine nucleotide-binding proteins

30 September 2017

1 reference

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A solution NMR study of the binding kinetics and the internal dynamics of an HIV-1 protease-substrate complex

30 September 2017

1 reference

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New approaches to the dynamic interpretation and prediction of NMR relaxation data from proteins.

30 September 2017

1 reference

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Dynamics and entropy of a calmodulin-peptide complex studied by NMR and molecular dynamics

30 September 2017

1 reference

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Evolutionarily conserved networks of residues mediate allosteric communication in proteins

30 September 2017

1 reference

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Temperature dependence of the internal dynamics of a calmodulin-peptide complex

30 September 2017

1 reference

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Side-chain dynamics of the SAP SH2 domain correlate with a binding hot spot and a region with conformational plasticity

30 September 2017

1 reference

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Deuterium spin probes of side-chain dynamics in proteins. 1. Measurement of five relaxation rates per deuteron in (13)C-labeled and fractionally (2)H-enriched proteins in solution

30 September 2017

1 reference

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Dynamic activation of protein function: a view emerging from NMR spectroscopy.

30 September 2017

1 reference

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Comparison of methyl rotation axis order parameters derived from model-free analyses of (2)H and (13)C longitudinal and transverse relaxation rates measured in the same protein sample

30 September 2017

1 reference

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New developments in isotope labeling strategies for protein solution NMR spectroscopy

30 September 2017

1 reference

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Binding sites in Escherichia coli dihydrofolate reductase communicate by modulating the conformational ensemble

30 September 2017

1 reference

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Redistribution and loss of side chain entropy upon formation of a calmodulin-peptide complex

30 September 2017

1 reference

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Evolutionarily conserved pathways of energetic connectivity in protein families

30 September 2017

1 reference

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Solution structure and dynamics of a designed hydrophobic core variant of ubiquitin

30 September 2017

1 reference

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Determination of order parameters and correlation times in proteins: a comparison between Bayesian, Monte Carlo and simple graphical methods

30 September 2017

1 reference

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The structural distribution of cooperative interactions in proteins: analysis of the native state ensemble

30 September 2017

1 reference

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A study of protein side-chain dynamics from new 2H auto-correlation and 13C cross-correlation NMR experiments: application to the N-terminal SH3 domain from drk.

30 September 2017

1 reference

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Theory of protein folding: the energy landscape perspective

30 September 2017

1 reference

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Insights into the local residual entropy of proteins provided by NMR relaxation

30 September 2017

1 reference

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Contributions to conformational entropy arising from bond vector fluctuations measured from NMR-derived order parameters: application to protein folding

30 September 2017

1 reference

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30 September 2017

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Correlation between dynamics and high affinity binding in an SH2 domain interaction

30 September 2017

1 reference

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13C nuclear magnetic resonance relaxation-derived psi, phi bond rotational energy barriers and rotational restrictions for glycine 13C alpha-methylenes in a GXX-repeat hexadecapeptide

30 September 2017

1 reference

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Backbone dynamics of Escherichia coli ribonuclease HI: correlations with structure and function in an active enzyme

30 September 2017

1 reference

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Hydrogen exchange and structural dynamics of proteins and nucleic acids

30 September 2017

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Rate theories and puzzles of hemeprotein kinetics

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Backbone dynamics of a model membrane protein: 13C NMR spectroscopy of alanine methyl groups in detergent-solubilized M13 coat protein

30 September 2017

1 reference

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Conformational substates in proteins

30 September 2017

1 reference

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Backbone dynamics of proteins as studied by 15N inverse detected heteronuclear NMR spectroscopy: application to staphylococcal nuclease

30 September 2017

1 reference

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Biosynthetic incorporation of 15N and 13C for assignment and interpretation of nuclear magnetic resonance spectra of proteins

30 September 2017

1 reference

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Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons

30 September 2017

1 reference

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The Energy Landscapes and Motions of Proteins

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1 reference

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Target enzyme recognition by calmodulin: 2.4 A structure of a calmodulin-peptide complex

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1 reference

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30 September 2017

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Increased rigidity of eglin c at acidic pH: evidence from NMR spin relaxation and MD simulations

30 September 2017

1 reference

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Assessing potential bias in the determination of rotational correlation times of proteins by NMR relaxation.

28 June 2018

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21 September 2018

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21 September 2018

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21 September 2018

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21 September 2018

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Analysis of side chain mobility among protein G B1 domain mutants with widely varying stabilities

21 September 2018

1 reference

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Long-range dynamic effects of point mutations propagate through side chains in the serine protease inhibitor eglin c.

21 September 2018

1 reference

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1H,13C-1H,1H dipolar cross-correlated spin relaxation in methyl groups

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1 reference

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Hydrophobic core fluidity of homologous protein domains: relation of side-chain dynamics to core composition and packing.

21 September 2018

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Measurement of dipolar cross-correlation in methylene groups in uniformly 13C-, 15N-labeled proteins

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Effect of cofactor binding and loop conformation on side chain methyl dynamics in dihydrofolate reductase

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Methyl side-chain dynamics in proteins using selective enrichment with a single isotopomer

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Measurement of methyl 13C-1H cross-correlation in uniformly 13C-, 15N-, labeled proteins.

21 September 2018

1 reference

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21 September 2018

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Optimized labeling of 13CHD2 methyl isotopomers in perdeuterated proteins: potential advantages for 13C relaxation studies of methyl dynamics of larger proteins

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Selective Methyl Group Protonation of Perdeuterated Proteins

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Deuterium spin probes of side-chain dynamics in proteins. 2. Spectral density mapping and identification of nanosecond time-scale side-chain motions

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[The SAIL method: a new NMR approach for larger protection]

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Allostery without conformational change. A plausible model

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Internal dynamics of human ubiquitin revealed by 13C-relaxation studies of randomly fractionally labeled protein

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Correlation between binding and dynamics at SH2 domain interfaces

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Mapping of the spectral densities of N-H bond motions in eglin c using heteronuclear relaxation experiments

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Beyond the Decoupling Approximation in the Model Free Approach for the Interpretation of NMR Relaxation of Macromolecules in Solution

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A simple method to measure 13CH2 heteronuclear dipolar cross-correlation spectral densities

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Model selection for the interpretation of protein side chain methyl dynamics

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Identifiers

DOI

10.1021/CR040422H

1 reference

14 August 2017

1 reference

PMC publication ID

2547146

14 August 2017

PubMed publication ID

16683749

1 reference

PMC publication ID

2547146