A computational method for the analysis and prediction of protein:phosphopeptide-binding sites. (Q36476769)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15576564%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

title

A computational method for the analysis and prediction of protein:phosphopeptide-binding sites (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15576564%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

main subject

computational biology

1 reference

1 reference

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5 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15576564%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

Michael B Yaffe

1 reference

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5 January 2020

publication date

2 December 2004

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5 January 2020

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5 January 2020

volume

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5 January 2020

issue

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5 January 2020

page(s)

131-139

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Raster3D: photorealistic molecular graphics

5 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Structural basis of phosphopeptide recognition by the BRCT domain of BRCA1.

30 September 2017

1 reference

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Structure and mechanism of BRCA1 BRCT domain recognition of phosphorylated BACH1 with implications for cancer

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Structure of the BRCT Repeats of BRCA1 Bound to a BACH1 Phosphopeptide

30 September 2017

1 reference

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Using electrostatic potentials to predict DNA-binding sites on DNA-binding proteins.

30 September 2017

1 reference

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Accurate and scalable identification of functional sites by evolutionary tracing

30 September 2017

1 reference

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The BRCT Domain Is a Phospho-Protein Binding Domain

30 September 2017

1 reference

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BRCT Repeats As Phosphopeptide-Binding Modules Involved in Protein Targeting

30 September 2017

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The molecular basis for phosphodependent substrate targeting and regulation of Plks by the Polo-box domain

30 September 2017

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Structural basis for phosphodependent substrate selection and orientation by the SCFCdc4 ubiquitin ligase

30 September 2017

1 reference

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Structural and functional versatility of the FHA domain in DNA-damage signaling by the tumor suppressor kinase Chk2

30 September 2017

1 reference

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Phosphotyrosine-binding domains in signal transduction

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Structure of the 53BP1 BRCT region bound to p53 and its comparison to the Brca1 BRCT structure

30 September 2017

1 reference

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Crystal structure of a phosphorylated Smad2. Recognition of phosphoserine by the MH2 domain and insights on Smad function in TGF-beta signaling

30 September 2017

1 reference

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PhosphoSerine/threonine binding domains: you can't pSERious?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Phosphoserine/threonine-binding domains

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

The molecular basis of FHA domain:phosphopeptide binding specificity and implications for phospho-dependent signaling mechanisms

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Structural basis for phosphoserine-proline recognition by group IV WW domains

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

The 1.7 A crystal structure of human cell cycle checkpoint kinase Chk1: implications for Chk1 regulation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Structural analysis of 14-3-3 phosphopeptide complexes identifies a dual role for the nuclear export signal of 14-3-3 in ligand binding

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Asparagine and glutamine: using hydrogen atom contacts in the choice of side-chain amide orientation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Sequence-specific and phosphorylation-dependent proline isomerization: a potential mitotic regulatory mechanism

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Reduced surface: an efficient way to compute molecular surfaces

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Binding of a high affinity phosphotyrosyl peptide to the Src SH2 domain: crystal structures of the complexed and peptide-free forms

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Recognition of a high-affinity phosphotyrosyl peptide by the Src homology-2 domain of p56lck

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Electrostatic interactions in macromolecules: theory and applications

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Structure of the BRCT repeats of BRCA1 bound to a BACH1 phosphopeptide: implications for signaling

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Phosphorylated claspin interacts with a phosphate-binding site in the kinase domain of Chk1 during ATR-mediated activation

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

Prediction of protein-protein interaction sites using patch analysis

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253325

4 December 2018

Identifiers

DOI

10.1110/PS.04964705

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15576564%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

1 reference

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5 January 2020

PubMed publication ID

15576564

1 reference

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