The N-terminal capping propensities of the D-helix modulate the allosteric activation of the Escherichia coli cAMP receptor protein (Q36407898)

14 August 2017

The N-terminal capping propensities of the D-helix modulate the allosteric activation of the Escherichia coli cAMP receptor protein (English)

1 reference

14 August 2017

1 reference

Alexey V Gribenko

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Shaoning Yu

1 reference

14 August 2017

Rodrigo A Maillard

series ordinal

1 reference

14 August 2017

J Ching Lee

series ordinal

1 reference

14 August 2017

language of work or name

English

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publication date

3 October 2012

1 reference

Journal of Biological Chemistry

14 August 2017

1 reference

14 August 2017

287

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14 August 2017

1 reference

14 August 2017

39402-39411

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Structure of apo-CAP reveals that large conformational changes are necessary for DNA binding

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Structural basis for cAMP-mediated allosteric control of the catabolite activator protein.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Anatomy of energetic changes accompanying urea-induced protein denaturation.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Predicting the energetics of osmolyte-induced protein folding/unfolding.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Linkage of multiequilibria in DNA recognition by the D53H Escherichia coli cAMP receptor protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: alteration of DNA binding specificity through alteration of DNA kinking

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Modeling the cAMP-induced allosteric transition using the crystal structure of CAP-cAMP at 2.1 A resolution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

The structure of a CAP-DNA complex having two cAMP molecules bound to each monomer

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Helix propagation and N-cap propensities of the amino acids measured in alanine-based peptides in 40 volume percent trifluoroethanol

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Structure of the CAP-DNA complex at 2.5 angstroms resolution: a complete picture of the protein-DNA interface

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Pivotal role of amino acid at position 138 in the allosteric hinge reorientation of cAMP receptor protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Infrared methods for study of hemoglobin reactions and structures

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Absolute requirement of cyclic nucleotide in the activation of the G141Q mutant cAMP receptor protein from Escherichia coli

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Acquisition and interpretation of hydrogen exchange data from peptides, polymers, and proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Application of fluorescence energy transfer and polarization to monitor Escherichia coli cAMP receptor protein and lac promoter interaction

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Allosteric changes in the cAMP receptor protein of Escherichia coli: hinge reorientation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Cyclic AMP-mediated intersubunit disulfide crosslinking of the cyclic AMP receptor protein of Escherichia coli

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Molecular origin of constant m-values, denatured state collapse, and residue-dependent transition midpoints in globular proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Structure of catabolite gene activator protein at 2.9-A resolution. Incorporation of amino acid sequence and interactions with cyclic AMP.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Conformational transitions of cyclic adenosine monophosphate receptor protein of Escherichia coli. A temperature-jump study.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Escherichia coli cAMP receptor protein: evidence for three protein conformational states with different promoter binding affinities.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

19F-n.m.r. studies of ligand binding to 5-fluorotryptophan- and 3-fluorotyrosine-containing cyclic AMP receptor protein from Escherichia coli

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Global conformational changes in allosteric proteins. A study of Escherichia coli cAMP receptor protein and muscle pyruvate kinase

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Communications between the high-affinity cyclic nucleotide binding sites in E. coli cyclic AMP receptor protein: effect of single site mutations

28 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.404806

A linear correlation between the energetics of allosteric communication and protein flexibility in the Escherichia coli cyclic AMP receptor protein revealed by mutation-induced changes in compressibility and amide hydrogen-deuterium exchange

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.404806

Interactive and Dominant Effects of Residues 128 and 141 on Cyclic Nucleotide and DNA Bindings in Escherichia coli cAMP Receptor Protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.404806

Ability of E. coli cyclic AMP receptor protein to differentiate cyclic nucelotides: effects of single site mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.404806

Role of residue 138 in the interdomain hinge region in transmitting allosteric signals for DNA binding in Escherichia coli cAMP receptor protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.404806

Intersubunit communications in Escherichia coli cyclic AMP receptor protein: studies of the ligand binding domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.404806

Ligand-induced conformational and structural dynamics changes in Escherichia coli cyclic AMP receptor protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.404806

Probing the Mechanism of CRP Activation by Site-Directed Mutagenesis: The Role of Serine 128 in the Allosteric Pathway of cAMP Receptor Protein Activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.404806

Dynamic activation of an allosteric regulatory protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.404806

Additive transfer free energies of the peptide backbone unit that are independent of the model compound and the choice of concentration scale

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.404806

Dissecting alpha-helices: position-specific analysis of alpha-helices in globular proteins

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3501046

Differential Perturbation of Intersubunit and Interdomain Communications by Glycine 141 Mutation in Escherichia coli CRP

21 September 2018

1 reference

12 December 2020

Monitoring the sizes of denatured ensembles of staphylococcal nuclease proteins: implications regarding m values, intermediates, and thermodynamics

1 reference

12 December 2020

Resolution-enhanced Fourier transform infrared spectroscopy of enzymes

1 reference

12 December 2020

Structure of a complex of catabolite gene activator protein and cyclic AMP refined at 2.5 A resolution

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M112.404806

1 reference

14 August 2017

1 reference

14 August 2017

PubMed publication ID

23035121

1 reference