Mapping of genetic and epigenetic regulatory networks using microarrays (Q36141628)

12 August 2017

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title

Mapping of genetic and epigenetic regulatory networks using microarrays (English)

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12 August 2017

Bas van Steensel

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language of work or name

English

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publication date

1 June 2005

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12 August 2017

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12 August 2017

volume

37 Suppl

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12 August 2017

page(s)

S18-24

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describes a project that uses

12 August 2017

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Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals

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Translating the Histone Code

21 January 2018

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Histones and histone modifications

21 January 2018

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Global nature of dynamic protein-chromatin interactions in vivo: three-dimensional genome scanning and dynamic interaction networks of chromatin proteins

21 January 2018

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Identification of unknown target genes of human transcription factors using chromatin immunoprecipitation

21 January 2018

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Identification of in vivo DNA targets of chromatin proteins using tethered dam methyltransferase

21 January 2018

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Chromatin profiling using targeted DNA adenine methyltransferase

21 January 2018

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Protein-DNA interaction mapping using genomic tiling path microarrays in Drosophila

21 January 2018

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Role of transposable elements in heterochromatin and epigenetic control

21 January 2018

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A microarray-based method for detecting methylated loci

21 January 2018

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Tumour class prediction and discovery by microarray-based DNA methylation analysis

21 January 2018

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Methylation-specific oligonucleotide microarray: a new potential for high-throughput methylation analysis

21 January 2018

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Genome-wide location and function of DNA binding proteins

21 January 2018

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Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association

21 January 2018

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Transcriptional regulatory networks in Saccharomyces cerevisiae

21 January 2018

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Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF

21 January 2018

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Transcriptional regulatory code of a eukaryotic genome

21 January 2018

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A common set of gene regulatory networks links metabolism and growth inhibition

21 January 2018

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An initial blueprint for myogenic differentiation

21 January 2018

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E2F integrates cell cycle progression with DNA repair, replication, and G(2)/M checkpoints

21 January 2018

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Control of pancreas and liver gene expression by HNF transcription factors

21 January 2018

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A global transcriptional regulatory role for c-Myc in Burkitt's lymphoma cells

21 January 2018

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Genomic targets of the human c-Myc protein

21 January 2018

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Genomic binding by the Drosophila Myc, Max, Mad/Mnt transcription factor network

21 January 2018

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Genomewide analysis of Drosophila GAGA factor target genes reveals context-dependent DNA binding

21 January 2018

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Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

21 January 2018

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CREB binds to multiple loci on human chromosome 22.

21 January 2018

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Distribution of NF-kappaB-binding sites across human chromosome 22

21 January 2018

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Program-specific distribution of a transcription factor dependent on partner transcription factor and MAPK signaling.

21 January 2018

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Identification of novel pRb binding sites using CpG microarrays suggests that E2F recruits pRb to specific genomic sites during S phase

21 January 2018

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Global position and recruitment of HATs and HDACs in the yeast genome.

21 January 2018

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Serial regulation of transcriptional regulators in the yeast cell cycle

21 January 2018

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DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes

21 January 2018

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Methyl-CpG binding proteins identify novel sites of epigenetic inactivation in human cancer.

21 January 2018

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The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote

21 January 2018

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Signaling network model of chromatin

21 January 2018

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Mapping global histone acetylation patterns to gene expression

21 January 2018

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Microarray deacetylation maps determine genome-wide functions for yeast histone deacetylases

21 January 2018

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Genome-wide binding map of the histone deacetylase Rpd3 in yeast

21 January 2018

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Rpd3p relocation mediates a transcriptional response to rapamycin in yeast

21 January 2018

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Genomic maps and comparative analysis of histone modifications in human and mouse

21 January 2018

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Histone variants, nucleosome assembly and epigenetic inheritance

21 January 2018

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Global nucleosome occupancy in yeast

21 January 2018

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Evidence for nucleosome depletion at active regulatory regions genome-wide

21 January 2018

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Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase

21 January 2018

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Distinct HP1 and Su(var)3-9 complexes bind to sets of developmentally coexpressed genes depending on chromosomal location

21 January 2018

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Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27.

21 January 2018

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Gene expression analysis using oligonucleotide arrays produced by maskless photolithography

21 January 2018

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DNA methylation profiling of the human major histocompatibility complex: a pilot study for the human epigenome project

21 January 2018

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A gene expression map for the euchromatic genome of Drosophila melanogaster.

21 January 2018

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Global identification of human transcribed sequences with genome tiling arrays

21 January 2018

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Chromatin architecture of the human genome: gene-rich domains are enriched in open chromatin fibers

21 January 2018

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Global survey of chromatin accessibility using DNA microarrays.

21 January 2018

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An algorithm for finding protein-DNA binding sites with applications to chromatin-immunoprecipitation microarray experiments

21 January 2018

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Regulatory element detection using correlation with expression.

21 January 2018

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Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation

21 January 2018

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Structure and evolution of transcriptional regulatory networks

21 January 2018

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Loss of silent-chromatin looping and impaired imprinting of DLX5 in Rett syndrome

21 January 2018

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Predicting gene expression from sequence

21 January 2018

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Computational discovery of gene modules and regulatory networks

21 January 2018

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Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data

21 January 2018

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Detailed map of a cis-regulatory input function

21 January 2018

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Analysis of genome-wide histone acetylation state and enzyme binding using DNA microarrays

21 January 2018

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7 January 2021

Use of chromatin immunoprecipitation assays in genome-wide location analysis of mammalian transcription factors

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7 January 2021

Epigenomic profiling using microarrays

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7 January 2021

Genome-wide profiling of DNA methylation reveals transposon targets of CHROMOMETHYLASE3

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7 January 2021

Hairy transcriptional repression targets and cofactor recruitment in Drosophila

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7 January 2021

Loss of estrogen receptor signaling triggers epigenetic silencing of downstream targets in breast cancer

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7 January 2021

Mapping DNA-protein interactions in large genomes by sequence tag analysis of genomic enrichment

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7 January 2021

The ENCODE (ENCyclopedia Of DNA Elements) Project

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7 January 2021

From signatures to models: understanding cancer using microarrays

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7 January 2021

Identifiers

DOI

10.1038/NG1559

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12 August 2017

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