An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations. (Q36067252)

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5 February 2020

title

An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations (English)

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genome-wide association study

5 February 2020

main subject

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5 February 2020

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5 February 2020

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5 February 2020

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5 February 2020

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5 February 2020

Quan Long

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5 February 2020

Magnus Nordborg

series ordinal

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language of work or name

English

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publication date

17 June 2012

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5 February 2020

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volume

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issue

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page(s)

825-830

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Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel

5 February 2020

cites work

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Genomic inflation factors under polygenic inheritance

2 October 2017

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A coastal cline in sodium accumulation in Arabidopsis thaliana is driven by natural variation of the sodium transporter AtHKT1;1.

2 October 2017

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2 October 2017

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Conditions under which genome-wide association studies will be positively misleading.

2 October 2017

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Biological, clinical and population relevance of 95 loci for blood lipids

2 October 2017

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Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines.

2 October 2017

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Mixed linear model approach adapted for genome-wide association studies

2 October 2017

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Variance component model to account for sample structure in genome-wide association studies

2 October 2017

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Rare variants create synthetic genome-wide associations

2 October 2017

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Analysis of North American Rheumatoid Arthritis Consortium data using a penalized logistic regression approach

2 October 2017

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Bayesian statistical methods for genetic association studies

2 October 2017

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Genome-wide association analysis of metabolic traits in a birth cohort from a founder population

2 October 2017

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Common variants at 30 loci contribute to polygenic dyslipidemia

2 October 2017

1 reference

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Simultaneous analysis of all SNPs in genome-wide and re-sequencing association studies

2 October 2017

1 reference

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Efficient control of population structure in model organism association mapping

2 October 2017

1 reference

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Accommodating linkage disequilibrium in genetic-association analyses via ridge regression

2 October 2017

1 reference

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Imputation-based analysis of association studies: candidate regions and quantitative traits

2 October 2017

1 reference

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Genomewide rapid association using mixed model and regression: a fast and simple method for genomewide pedigree-based quantitative trait loci association analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386481

An Arabidopsis example of association mapping in structured samples

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386481

Principal components analysis corrects for stratification in genome-wide association studies

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386481

A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

2 October 2017

1 reference

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The effects of human population structure on large genetic association studies

2 October 2017

1 reference

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Population stratification and spurious allelic association

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386481

A unified stepwise regression procedure for evaluating the relative effects of polymorphisms within a gene using case/control or family data: application to HLA in type 1 diabetes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386481

Genomic control for association studies

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386481

Association mapping in structured populations

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386481

Precision mapping of quantitative trait loci

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386481

Fast and robust association tests for untyped SNPs in case-control studies

2 October 2017

1 reference

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Mapping in structured populations by resample model averaging

11 July 2018

1 reference

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Interval mapping of multiple quantitative trait loci

11 July 2018

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SNP Selection in genome‐wide and candidate gene studies via penalized logistic regression

11 July 2018

1 reference

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Joint identification of multiple genetic variants via elastic-net variable selection in a genome-wide association analysis

23 September 2018

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The Correlation between Relatives on the Supposition of Mendelian Inheritance

23 September 2018

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Extended Bayesian information criteria for model selection with large model spaces

21 January 2018

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Population Structure and Cryptic Relatedness in Genetic Association Studies

21 January 2018

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Genome-wide association study of leaf architecture in the maize nested association mapping population

21 January 2018

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Identifying QTLs and Epistasis in Structured Plant Populations Using Adaptive Mixed LASSO

21 January 2018

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21 January 2018

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Out of India, thrice: diversification of Asian forest scorpions reveals three colonizations of Southeast Asia

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7 January 2021

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Identifiers

DOI

10.1038/NG.2314

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5 February 2020

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5 February 2020

PubMed publication ID

22706313

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