High-resolution genome-wide mapping of HIF-binding sites by ChIP-seq. (Q36029877)

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26 January 2020

title

High-resolution genome-wide mapping of HIF-binding sites by ChIP-seq (English)

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26 January 2020

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26 January 2020

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26 January 2020

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26 January 2020

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26 January 2020

author name string

Spyros Oikonomopoulos

series ordinal

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26 January 2020

Jiannis Ragoussis

series ordinal

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26 January 2020

language of work or name

English

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publication date

29 March 2011

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26 January 2020

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26 January 2020

volume

117

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26 January 2020

issue

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26 January 2020

page(s)

e207-17

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Chromatin accessibility pre-determines glucocorticoid receptor binding patterns.

26 January 2020

cites work

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2 October 2017

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Genome-wide identification of hypoxia-inducible factor binding sites and target genes by a probabilistic model integrating transcription-profiling data and in silico binding site prediction

2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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Genome-wide association of hypoxia-inducible factor (HIF)-1alpha and HIF-2alpha DNA binding with expression profiling of hypoxia-inducible transcripts

2 October 2017

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Integrative analysis of HIF binding and transactivation reveals its role in maintaining histone methylation homeostasis

2 October 2017

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HIF-alpha effects on c-Myc distinguish two subtypes of sporadic VHL-deficient clear cell renal carcinoma

2 October 2017

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The impact of O2 availability on human cancer

2 October 2017

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An integrated software system for analyzing ChIP-chip and ChIP-seq data

2 October 2017

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Microarray analyses of hypoxia-regulated genes in an aryl hydrocarbon receptor nuclear translocator (Arnt)-dependent manner

2 October 2017

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The von Hippel-Lindau tumour suppressor protein: O2 sensing and cancer

2 October 2017

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Oxygen sensing by metazoans: the central role of the HIF hydroxylase pathway

2 October 2017

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A gain-of-function mutation in the HIF2A gene in familial erythrocytosis

2 October 2017

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Somatic inactivation of the PHD2 prolyl hydroxylase causes polycythemia and congestive heart failure

2 October 2017

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HIF prolyl hydroxylase inhibition results in endogenous erythropoietin induction, erythrocytosis, and modest fetal hemoglobin expression in rhesus macaques

2 October 2017

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A comparative analysis of genome-wide chromatin immunoprecipitation data for mammalian transcription factors

2 October 2017

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Hypoxia signalling in cancer and approaches to enforce tumour regression

2 October 2017

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Differential regulation of the transcriptional activities of hypoxia-inducible factor 1 alpha (HIF-1alpha) and HIF-2alpha in stem cells

2 October 2017

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Concordant regulation of gene expression by hypoxia and 2-oxoglutarate-dependent dioxygenase inhibition: the role of HIF-1alpha, HIF-2alpha, and other pathways

2 October 2017

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HIF-2alpha regulates Oct-4: effects of hypoxia on stem cell function, embryonic development, and tumor growth.

2 October 2017

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Integration of oxygen signaling at the consensus HRE.

2 October 2017

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2 October 2017

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Differential gene up-regulation by hypoxia-inducible factor-1alpha and hypoxia-inducible factor-2alpha in HEK293T cells

2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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HIF-1alpha induces cell cycle arrest by functionally counteracting Myc.

2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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Hypoxia induces transcription factor ETS-1 via the activity of hypoxia-inducible factor-1.

2 October 2017

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Sequence logos: a new way to display consensus sequences

2 October 2017

1 reference

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Hypoxia-inducible nuclear factors bind to an enhancer element located 3' to the human erythropoietin gene

2 October 2017

1 reference

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A nuclear factor induced by hypoxia via de novo protein synthesis binds to the human erythropoietin gene enhancer at a site required for transcriptional activation

2 October 2017

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Identification of a functional hypoxia-responsive element that regulates the expression of the egl nine homologue 3 (egln3/phd3) gene

2 October 2017

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Characterisation of functional domains within the mouse erythropoietin 3' enhancer conveying oxygen-regulated responses in different cell lines

11 July 2018

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11 July 2018

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GSEA-P: a desktop application for Gene Set Enrichment Analysis.

23 September 2018

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Target gene selectivity of hypoxia-inducible factor-alpha in renal cancer cells is conveyed by post-DNA-binding mechanisms.

23 September 2018

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Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays

23 September 2018

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HIF-1alpha induces genetic instability by transcriptionally downregulating MutSalpha expression.

23 September 2018

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Transcriptional regulation of vascular endothelial cell responses to hypoxia by HIF-1.

23 September 2018

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10.1182/BLOOD-2010-10-314427

23 September 2018

Identifiers

DOI

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26 January 2020

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26 January 2020

PubMed publication ID

21447827

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21447827%20AND%20SRC:MED&resulttype=core&format=json