Signal correlations in ecological niches can shape the organization and evolution of bacterial gene regulatory networks (Q35966780)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23046950%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

title

Signal correlations in ecological niches can shape the organization and evolution of bacterial gene regulatory networks (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23046950%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

1 reference

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23046950%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23046950%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Yann S Dufour

1 reference

11 August 2017

1 January 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23046950%20AND%20SRC:MED&resulttype=core&format=json

Advances in Microbial Physiology

10 March 2020

published in

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10 March 2020

volume

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10 March 2020

page(s)

1-36

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maintained by WikiProject

10 March 2020

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Niche adaptation by expansion and reprogramming of general transcription factors.

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1 reference

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1 reference

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2 October 2017

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2 October 2017

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2 October 2017

1 reference

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2 October 2017

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2 October 2017

1 reference

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2 October 2017

1 reference

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RpoH(II) activates oxidative-stress defense systems and is controlled by RpoE in the singlet oxygen-dependent response in Rhodobacter sphaeroides

11 July 2018

1 reference

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11 July 2018

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11 July 2018

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11 July 2018

1 reference

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Operon formation is driven by co-regulation and not by horizontal gene transfer

11 July 2018

1 reference

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The anti-sigma factors

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Eubacterial sigma-factors

11 July 2018

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Insertion of a novel DNA sequence, 1S1186, upstream of the silent carbapenemase gene cfiA, promotes expression of carbapenem resistance in clinical isolates of Bacteroides fragilis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

Target transcription binding sites differentiate two groups of MerR-monovalent metal ion sensors

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

Horizontal gene transfer in evolution: facts and challenges.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) sigma factor protein family.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

Adaptive prediction of environmental changes by microorganisms.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

A predictive model for transcriptional control of physiology in a free living cell.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

Choosing BLAST options for better detection of orthologs as reciprocal best hits

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

Structure and evolution of gene regulatory networks in microbial genomes

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

PhyME: a software tool for finding motifs in sets of orthologous sequences

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

ChIP-seq: welcome to the new frontier

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

Evolutionary dynamics of prokaryotic transcriptional regulatory networks

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

Transcriptional response of Escherichia coli to external copper.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

Genome Properties: a system for the investigation of prokaryotic genetic content for microbiology, genome annotation and comparative genomics

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

Gene regulatory network growth by duplication

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

The effects of selection against spurious transcription factor binding sites.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

Control of transcription by nucleoid proteins

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

Insertion of IS2 creates a novel ampC promoter in Escherichia coli

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4540341

Transcription regulation and environmental adaptation in bacteria

24 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23046950

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Escherichia coli mutator (Delta)polA is defective in base mismatch correction: the nature of in vivo DNA replication errors

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23046950

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/B978-0-12-394423-8.00001-9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23046950%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23046950%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

PubMed publication ID

23046950

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23046950%20AND%20SRC:MED&resulttype=core&format=json