A Helitron transposon reconstructed from bats reveals a novel mechanism of genome shuffling in eukaryotes (Q35941741)

11 August 2017

A Helitron transposon reconstructed from bats reveals a novel mechanism of genome shuffling in eukaryotes (English)

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11 August 2017

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31 May 2020

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31 May 2020

Zoltán Ivics

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31 May 2020

Ivana Grabundzija

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31 May 2020

Simon A Messing

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31 May 2020

Rachel L Cosby

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31 May 2020

Ilija Bilic

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Csaba Miskey

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31 May 2020

Vladimir Kapitonov

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31 May 2020

Tanja Diem

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31 May 2020

Anna Dalda

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31 May 2020

Jerzy Jurka

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31 May 2020

Ellen J Pritham

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31 May 2020

Fred Dyda

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31 May 2020

Andreas Gogol-Döring

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31 May 2020

language of work or name

English

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publication date

2 March 2016

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11 August 2017

Nature Communications

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31 May 2020

volume

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31 May 2020

page(s)

10716

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Creative Commons Attribution 4.0 International

31 May 2020

start time

2 March 2016

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April 2022 Public Data File from Crossref

copyrighted

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cites work

Helitrons, the Eukaryotic Rolling-circle Transposable Elements.

1 reference

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Rolling-circle transposons catalyze genomic innovation in a mammalian lineage

2 October 2017

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HelitronScanner uncovers a large overlooked cache of Helitron transposons in many plant genomes

2 October 2017

1 reference

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An atlas of active enhancers across human cell types and tissues

2 October 2017

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Breaking and joining single-stranded DNA: the HUH endonuclease superfamily

2 October 2017

1 reference

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Identification and evolution of the silkworm helitrons and their contribution to transcripts

2 October 2017

1 reference

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GENCODE: the reference human genome annotation for The ENCODE Project

2 October 2017

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Negative supercoiling creates single-stranded patches of DNA that are substrates for AID-mediated mutagenesis

2 October 2017

1 reference

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Structural characterization of helitrons and their stepwise capturing of gene fragments in the maize genome

2 October 2017

1 reference

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Mobilizing the genome of Lepidoptera through novel sequence gains and end creation by non-autonomous Lep1 Helitrons

2 October 2017

1 reference

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Single-stranded DNA transposition is coupled to host replication.

2 October 2017

1 reference

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The polychromatic Helitron landscape of the maize genome

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Distribution, diversity, evolution, and survival of Helitrons in the maize genome

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Structure-based discovery and description of plant and animal Helitrons

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Replication of porcine circoviruses

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Molecular evolution of a novel hyperactive Sleeping Beauty transposase enables robust stable gene transfer in vertebrates

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Transposable elements and the evolution of regulatory networks

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Helitrons on a roll: eukaryotic rolling-circle transposons

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Massive amplification of rolling-circle transposons in the lineage of the bat Myotis lucifugus

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

ISCR elements: novel gene-capturing systems of the 21st century?

2 October 2017

1 reference

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Transposition of ISHp608, member of an unusual family of bacterial insertion sequences

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Transposon Mutagenesis of the Mouse Germline

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Mfold web server for nucleic acid folding and hybridization prediction

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Treasures in the attic: rolling circle transposons discovered in eukaryotic genomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Rolling-circle transposons in eukaryotes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Regulated transposition of a fish transposon in the mouse germ line

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Chromosomal transposition of a Tc1/mariner-like element in mouse embryonic stem cells

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Behavior of supercoiled DNA.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Helicases: a unifying structural theme?

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Preferential transposition of Drosophila P elements to nearby chromosomal sites

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Differential roles of the transposon termini in IS91 transposition

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Crystal structure of the catalytic domain of HIV-1 integrase: similarity to other polynucleotidyl transferases

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Two juxtaposed tyrosyl-OH groups participate in phi X174 gene A protein catalysed cleavage and ligation of DNA

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Supercoiling of the DNA template during transcription

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes and archaebacteria

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Transcriptionally driven cruciform formation in vivo

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

IS91 transposase is related to the rolling-circle-type replication proteins of the pUB110 family of plasmids

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Experimental evidence for IS1294b-mediated transposition of the blaCMY-2 cephalosporinase gene in Enterobacteriaceae

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Origins, genetic organization and transcription of a family of non-autonomous helitron elements in maize

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Distribution of IS91 family insertion sequences in bacterial genomes: evolutionary implications

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Pack-MULE transposable elements mediate gene evolution in plants

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

The maize genome contains a helitron insertion

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Single-stranded DNA intermediates in IS91 rolling-circle transposition

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4778049

Large-scale effects of transcriptional DNA supercoiling in vivo

24 September 2018

1 reference

12 December 2020

The limited distribution of Helitrons to vesper bats supports horizontal transfer

1 reference

12 December 2020

Direct evidence for the effect of transcription on local DNA supercoiling in vivo

1 reference

12 December 2020

Computer-assisted dissection of rolling circle DNA replication

1 reference

12 December 2020

Model-based identification of Helitrons results in a new classification of their families in Arabidopsis thaliana

1 reference

12 December 2020

Identifiers

DOI

10.1038/NCOMMS10716

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26931494%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

31 May 2020

ADS bibcode

2016NatCo...710716G

0 references

0 references

1 reference

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31 May 2020

PubMed publication ID

26931494

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26931494%20AND%20SRC:MED&resulttype=core&format=json