Analysis of the microbiome: Advantages of whole genome shotgun versus 16S amplicon sequencing. (Q35882140)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26718401%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

title

Analysis of the microbiome: Advantages of whole genome shotgun versus 16S amplicon sequencing (English)

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3 March 2020

0 references

1 reference

whole genome sequencing

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3 March 2020

Ravi Ranjan

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3 March 2020

Asha Rani

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3 March 2020

Halvor S McGee

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3 March 2020

David L Perkins

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3 March 2020

language of work or name

English

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publication date

22 December 2015

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Biochemical and Biophysical Research Communications

3 March 2020

published in

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3 March 2020

volume

469

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3 March 2020

issue

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3 March 2020

page(s)

967-977

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Ecology and exploration of the rare biosphere

3 March 2020

cites work

1 reference

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Next-generation sequencing of 16S ribosomal RNA gene amplicons

11 July 2018

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An integrated catalog of reference genes in the human gut microbiome

11 July 2018

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Strengths and limitations of 16S rRNA gene amplicon sequencing in revealing temporal microbial community dynamics.

11 July 2018

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MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences

11 July 2018

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Sequencing depth and coverage: key considerations in genomic analyses

11 July 2018

1 reference

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Ribosomal Database Project: data and tools for high throughput rRNA analysis

11 July 2018

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Fecal transplant: a safe and sustainable clinical therapy for restoring intestinal microbial balance in human disease?

11 July 2018

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MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads

11 July 2018

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Transfer of intestinal microbiota from lean donors increases insulin sensitivity in individuals with metabolic syndrome

11 July 2018

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Human gut microbiome viewed across age and geography

11 July 2018

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A framework for human microbiome research

11 July 2018

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Structure, function and diversity of the healthy human microbiome

11 July 2018

1 reference

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Growing unculturable bacteria

11 July 2018

1 reference

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The human microbiome: at the interface of health and disease

11 July 2018

1 reference

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Experimental and analytical tools for studying the human microbiome

11 July 2018

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Human microbiome in health and disease

11 July 2018

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Direct sequencing of the human microbiome readily reveals community differences

11 July 2018

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Ab initio gene identification in metagenomic sequences

11 July 2018

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A human gut microbial gene catalogue established by metagenomic sequencing

11 July 2018

1 reference

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Use of ichip for high-throughput in situ cultivation of "uncultivable" microbial species

11 July 2018

1 reference

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The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

11 July 2018

1 reference

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Prokaryotic taxonomy and phylogeny in the genomic era: advancements and challenges ahead

11 July 2018

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Metagenomic analysis of the human distal gut microbiome

11 July 2018

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The Uncultured Microbial Majority

11 July 2018

1 reference

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Fecal transplantation poses dilemma for FDA.

11 July 2018

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A user's guide to quantitative and comparative analysis of metagenomic datasets

24 September 2018

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Fecal microbiota transplantation--an old therapy comes of age.

24 September 2018

1 reference

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10.1016/J.BBRC.2015.12.083

24 September 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26718401%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26718401%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

PubMed publication ID

26718401

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26718401%20AND%20SRC:MED&resulttype=core&format=json