cMonkey2: Automated, systematic, integrated detection of co-regulated gene modules for any organism (Q35885874)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25873626%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

title

cMonkey2: Automated, systematic, integrated detection of co-regulated gene modules for any organism (English)

1 reference

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5 March 2020

David J Reiss

1 reference

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5 March 2020

Wei-Ju Wu

series ordinal

1 reference

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5 March 2020

language of work or name

English

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publication date

14 April 2015

1 reference

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5 March 2020

published in

Nucleic Acids Research

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5 March 2020

volume

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issue

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5 March 2020

page(s)

e87

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Creative Commons Attribution 4.0 International

5 March 2020

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyrighted

0 references

describes a project that uses

Jupyter notebook file

1 reference

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

1 reference

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

1 reference

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Methods and statistics for combining motif match scores

11 July 2018

1 reference

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Collective dynamics of 'small-world' networks

11 July 2018

1 reference

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RSAT 2011: regulatory sequence analysis tools.

11 July 2018

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MotifVoter: a novel ensemble method for fine-grained integration of generic motif finders

24 September 2018

1 reference

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Using Weeder for the discovery of conserved transcription factor binding sites.

24 September 2018

1 reference

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A predictive model for transcriptional control of physiology in a free living cell.

24 September 2018

1 reference

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Genome-wide discovery of transcriptional modules from DNA sequence and gene expression.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4513845

Revealing modular organization in the yeast transcriptional network.

24 September 2018

1 reference

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Natural engineering principles of electron tunnelling in biological oxidation-reduction

24 September 2018

1 reference

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Chromosomal gradient of histone acetylation established by Sas2p and Sir2p functions as a shield against gene silencing

21 January 2018

1 reference

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Comprehensive genomic characterization of squamous cell lung cancers

21 January 2018

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Using the Gibbs Motif Sampler for Phylogenetic Footprinting

21 January 2018

1 reference

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21 January 2018

Identifiers

DOI

10.1093/NAR/GKV300

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25873626%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25873626%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

PubMed publication ID

25873626

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25873626%20AND%20SRC:MED&resulttype=core&format=json