Mapping biomedical concepts onto the human genome by mining literature on chromosomal aberrations (Q35829278)

10 August 2017

Mapping biomedical concepts onto the human genome by mining literature on chromosomal aberrations (English)

1 reference

10 August 2017

0 references

Björn Menten

1 reference

10 August 2017

Bernard Thienpont

0 references

Frank Speleman

1 reference

10 August 2017

Yves Moreau

1 reference

10 August 2017

Joris Vermeesch

1 reference

10 August 2017

Bart De Moor

1 reference

10 August 2017

Steven Van Vooren

1 reference

PMC publication ID

1885641

10 August 2017

language of work or name

English

0 references

publication date

1 April 2007

1 reference

10 August 2017

Nucleic Acids Research

1 reference

10 August 2017

1 reference

10 August 2017

1 reference

10 August 2017

2533-2543

1 reference

Using GOstats to test gene lists for GO term association

10 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

Gene prioritization through genomic data fusion

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

Implementing the iHOP concept for navigation of biomedical literature

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

G2D: a tool for mining genes associated with disease

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

GObar: a gene ontology based analysis and visualization tool for gene sets

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

goCluster integrates statistical analysis and functional interpretation of microarray expression data.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

Ontological analysis of gene expression data: current tools, limitations, and open problems

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

GeneSeeker: extraction and integration of human disease-related information from web-based genetic databases

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

GFINDer: genetic disease and phenotype location statistical analysis and mining of dynamically annotated gene lists

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

Systematic association of genes to phenotypes by genome and literature mining

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

Integration of text- and data-mining using ontologies successfully selects disease gene candidates

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

HCAD, closing the gap between breakpoints and genes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

GOToolBox: functional analysis of gene datasets based on Gene Ontology

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

OntologyTraverser: an R package for GO analysis.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

New strategy for the representation and the integration of biomolecular knowledge at a cellular scale

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

TXTGate: profiling gene groups with text-based information

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

An ontology of human developmental anatomy

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

Information extraction from full text scientific articles: where are the keywords?

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

GeneMerge—post-genomic analysis, data mining, and hypothesis testing

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

GoMiner: a resource for biological interpretation of genomic and proteomic data

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

Gene ontology: tool for the unification of biology

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

A chromosomal duplication map of malformations: regions of suspected haplo- and triplolethality--and tolerance of segmental aneuploidy--in humans

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

A chromosomal deletion map of human malformations.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

Nomenclature for G-bands in rat chromosomes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

Markov model recognition and classification of DNA/protein sequences within large text databases

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

Refining chromosomal region critical for Down syndrome-related heart defects with a case of cryptic 21q22.2 duplication.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

Delineation of 7q11.2 deletions associated with Williams-Beuren syndrome and mapping of a repetitive sequence to within and to either side of the common deletion

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885641

FISH investigation of 22q11.2 deletion in patients with immunodeficiency and/or cardiac abnormalities

24 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17403693

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A text-mining analysis of the human phenome

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17403693

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Jagged1 mutations in patients ascertained with isolated congenital heart defects

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17403693

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKM054

1 reference

10 August 2017

1 reference

PMC publication ID

1885641

10 August 2017

PubMed publication ID

17403693

1 reference

PMC publication ID

1885641