Complementarity between epsilon and phi sequences in pregenomic RNA influences hepatitis B virus replication efficiency. (Q35748415)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17056086%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

title

Complementarity between epsilon and phi sequences in pregenomic RNA influences hepatitis B virus replication efficiency (English)

1 reference

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21 December 2019

1 reference

1 reference

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21 December 2019

Claudia E Oropeza

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21 December 2019

language of work or name

English

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publication date

23 October 2006

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21 December 2019

number of pages

1 reference

based on heuristic

inferred from page(s)

published in

Virology

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PubMed publication ID

17056086

10 August 2017

volume

359

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21 December 2019

issue

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21 December 2019

page(s)

371-381

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Base pairing between the 5' half of epsilon and a cis-acting sequence, phi, makes a contribution to the synthesis of minus-strand DNA for human hepatitis B virus

21 December 2019

cites work

1 reference

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Hepatitis B virus reverse transcriptase and epsilon RNA sequences required for specific interaction in vitro

27 July 2018

1 reference

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A pregenomic RNA sequence adjacent to DR1 and complementary to epsilon influences hepatitis B virus replication efficiency.

27 July 2018

1 reference

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Mechanisms of inhibition of nuclear hormone receptor-dependent hepatitis B virus replication by hepatocyte nuclear factor 3beta.

27 July 2018

1 reference

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The duck hepatitis B virus polymerase is activated by its RNA packaging signal, epsilon

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Insertions within epsilon affect synthesis of minus-strand DNA before the template switch for duck hepatitis B virus

27 July 2018

1 reference

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cis-Acting sequences in addition to donor and acceptor sites are required for template switching during synthesis of plus-strand DNA for duck hepatitis B virus

27 July 2018

1 reference

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Transcomplementation of nucleotide priming and reverse transcription between independently expressed TP and RT domains of the hepatitis B virus reverse transcriptase

27 July 2018

1 reference

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Sequence identity of the terminal redundancies on the minus-strand DNA template is necessary but not sufficient for the template switch during hepadnavirus plus-strand DNA synthesis

27 July 2018

1 reference

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Mutations within DR2 independently reduce the amount of both minus- and plus-strand DNA synthesized during duck hepatitis B virus replication.

27 July 2018

1 reference

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A bulged region of the hepatitis B virus RNA encapsidation signal contains the replication origin for discontinuous first-strand DNA synthesis

27 July 2018

1 reference

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Hepadnavirus reverse transcription initiates within the stem-loop of the RNA packaging signal and employs a novel strand transfer.

27 July 2018

1 reference

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Mutations in the epsilon sequences of human hepatitis B virus affect both RNA encapsidation and reverse transcription

27 July 2018

1 reference

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Novel mechanism for reverse transcription in hepatitis B viruses

27 July 2018

1 reference

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The encapsidation signal on the hepatitis B virus RNA pregenome forms a stem-loop structure that is critical for its function

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

An RNA stem-loop structure directs hepatitis B virus genomic RNA encapsidation

27 July 2018

1 reference

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Nucleotide priming and reverse transcriptase activity of hepatitis B virus polymerase expressed in insect cells

27 July 2018

1 reference

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Role of RNA in enzymatic activity of the reverse transcriptase of hepatitis B viruses.

27 July 2018

1 reference

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Site-specific RNA binding by a hepatitis B virus reverse transcriptase initiates two distinct reactions: RNA packaging and DNA synthesis.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Hepadnavirus P protein utilizes a tyrosine residue in the TP domain to prime reverse transcription.

27 July 2018

1 reference

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Reverse transcription in hepatitis B viruses is primed by a tyrosine residue of the polymerase

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Transfer of the minus strand of DNA during hepadnavirus replication is not invariable but prefers a specific location.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Excretion of hepatitis B surface antigen particles from mouse cells transformed with cloned viral DNA.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Hepatitis B virus transcription in the infected liver

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Biochemical and genetic evidence for the hepatitis B virus replication strategy

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Replication strategy of human hepatitis B virus

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Initiation and termination of duck hepatitis B virus DNA synthesis during virus maturation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Expression of hepatitis B virus surface and core antigens: influences of pre-S and precore sequences

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

RNA transcripts of hepatitis B virus in hepatocellular carcinoma

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Molecular analysis of the function of direct repeats and a polypurine tract for plus-strand DNA priming in woodchuck hepatitis virus

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Analysis of hepatitis B virus transcripts in infected human livers

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform Extraction

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Evidence that a capped oligoribonucleotide is the primer for duck hepatitis B virus plus-strand DNA synthesis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Preferred translation of human hepatitis B virus polymerase from core protein- but not from precore protein-specific transcript.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

The P gene product of hepatitis B virus is required as a structural component for genomic RNA encapsidation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

A short cis-acting sequence is required for hepatitis B virus pregenome encapsidation and sufficient for packaging of foreign RNA.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Morphogenetic and regulatory effects of mutations in the envelope proteins of an avian hepadnavirus

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Sequence-independent RNA cleavages generate the primers for plus strand DNA synthesis in hepatitis B viruses: implications for other reverse transcribing elements

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Identification of a signal necessary for initiation of reverse transcription of the hepadnavirus genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Mutations affecting hepadnavirus plus-strand DNA synthesis dissociate primer cleavage from translocation and reveal the origin of linear viral DNA.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Polymerase gene products of hepatitis B viruses are required for genomic RNA packaging as well as for reverse transcription

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

The reverse transcriptase of hepatitis B virus acts as a protein primer for viral DNA synthesis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Hepadnaviral assembly is initiated by polymerase binding to the encapsidation signal in the viral RNA genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Nucleotide sequence of the hepatitis B virus genome (subtype ayw) cloned in E. coli

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

DNA sequencing with chain-terminating inhibitors

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Transcriptional regulation of hepatitis B virus by nuclear hormone receptors is a critical determinant of viral tropism

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Formation of a functional hepatitis B virus replication initiation complex involves a major structural alteration in the RNA template.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Evidence for activation of the hepatitis B virus polymerase by binding of its RNA template.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

RNA sequences controlling the initiation and transfer of duck hepatitis B virus minus-strand DNA.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Hepatitis B virus contains protein attached to the 5' terminus of its complete DNA strand

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Formation of the pool of covalently closed circular viral DNA in hepadnavirus-infected cells

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Hepatitis B virus RNA transcripts and DNA in chronic liver disease

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

Sequences 5' to the polyadenylation signal mediate differential poly(A) site use in hepatitis B viruses

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1850982

10.1016/J.VIROL.2006.08.036

25 September 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17056086%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17056086%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

PubMed publication ID

17056086

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17056086%20AND%20SRC:MED&resulttype=core&format=json