Distinct p53 genomic binding patterns in normal and cancer-derived human cells (Q35737507)

10 August 2017

title

Distinct p53 genomic binding patterns in normal and cancer-derived human cells (English)

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10 August 2017

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10 August 2017

Krassimira Botcheva

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10 August 2017

Sean R McCorkle

series ordinal

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10 August 2017

John J Dunn

series ordinal

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10 August 2017

Carl W Anderson

series ordinal

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10 August 2017

language of work or name

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15 December 2011

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10 August 2017

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10 August 2017

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10 August 2017

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10 August 2017

page(s)

4237-4249

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describes a project that uses

10 August 2017

SQL

1 reference

26 June 2022

https://europepmc.org/article/PMC/PMC3272258

inferred from PubMed Central ID database lookup

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High nucleosome occupancy is encoded at human regulatory sequences

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Examination of the expanding pathways for the regulation of p21 expression and activity

12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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Alu element-mediated gene silencing

12 July 2018

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Characterization of genome-wide p53-binding sites upon stress response.

12 July 2018

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The RNA polymerase II core promoter - the gateway to transcription.

12 July 2018

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Transcriptional control of human p53-regulated genes

12 July 2018

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Killin is a p53-regulated nuclear inhibitor of DNA synthesis

12 July 2018

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p53 regulates maternal reproduction through LIF

12 July 2018

1 reference

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Critical DNA binding interactions of the insulator protein CTCF: a small number of zinc fingers mediate strong binding, and a single finger-DNA interaction controls binding at imprinted loci

12 July 2018

1 reference

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Regulation of H-ras splice variant expression by cross talk between the p53 and nonsense-mediated mRNA decay pathways.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

Divergent evolution of human p53 binding sites: cell cycle versus apoptosis

12 July 2018

1 reference

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Mapping of transcription factor binding regions in mammalian cells by ChIP: comparison of array- and sequencing-based technologies

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

p53 targets identified by protein expression profiling

12 July 2018

1 reference

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The epigenomics of cancer

12 July 2018

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An integrated map of p53-binding sites and histone modification in the human ENCODE regions

12 July 2018

1 reference

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Functional analysis of p53 binding under differential stresses

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

The versatile interactions of p53 with DNA: when flexibility serves specificity

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

Regulation of the human p21(waf1/cip1) gene promoter via multiple binding sites for p53 and the vitamin D3 receptor.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

A global map of p53 transcription-factor binding sites in the human genome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

Chromatin immunoprecipitation-based screen to identify functional genomic binding sites for sequence-specific transactivators

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

Identification of the mismatch repair genes PMS2 and MLH1 as p53 target genes by using serial analysis of binding elements

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

The nuclear lamina comes of age.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

A highly conserved proapoptotic gene, IKIP, located next to the APAF1 gene locus, is regulated by p53

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

Cytoplasmic foci are sites of mRNA decay in human cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

An abundance of bidirectional promoters in the human genome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

The p53MH algorithm and its application in detecting p53-responsive genes

12 July 2018

1 reference

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Human smooth muscle alpha-actin gene is a transcriptional target of the p53 tumor suppressor protein

12 July 2018

1 reference

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Inhibition of mouse thymidylate synthase promoter activity by the wild-type p53 tumor suppressor protein

12 July 2018

1 reference

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A transcriptionally active DNA-binding site for human p53 protein complexes

12 July 2018

1 reference

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Definition of a consensus binding site for p53

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

Characterization of a new human diploid cell strain, IMR-90.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

Life or death: p53-induced apoptosis requires DNA binding cooperativity.

12 July 2018

1 reference

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DNA methylation inhibits p53-mediated survivin repression.

25 September 2018

1 reference

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Chromatin immunoprecipitation-on-chip reveals stress-dependent p53 occupancy in primary normal cells but not in established cell lines.

25 September 2018

1 reference

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Algorithm for prediction of tumour suppressor p53 affinity for binding sites in DNA.

25 September 2018

1 reference

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Cooperative binding of tetrameric p53 to DNA.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

p21B, a variant of p21(Waf1/Cip1), is induced by the p53 family

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272258

Methylation and deamination of CpGs generate p53-binding sites on a genomic scale

25 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22127205

12 December 2020

inferred from PubMed ID database lookup

Site-specific DNA methylation in the neurofibromatosis (NF1) promoter interferes with binding of CREB and SP1 transcription factors

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22127205

12 December 2020

inferred from PubMed ID database lookup

Stem cell biology meets p53

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PubMed

https://pubmed.ncbi.nlm.nih.gov/22127205

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.4161/CC.10.24.18383

1 reference

10 August 2017

1 reference

10 August 2017

1 reference