Bacteriophage-Induced Modifications of Host RNA Polymerase (Q35550574)

8 August 2017

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title

Bacteriophage-induced modifications of host RNA polymerase (English)

1 reference

8 August 2017

Bacteriophage-Induced Modifications of Host RNA Polymerase (English)

1 reference

Crossref

DOI

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

18 March 2024

1 reference

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

18 March 2024

Sergei Nechaev

1 reference

8 August 2017

Konstantin Severinov

1 reference

8 August 2017

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=14527281

18 March 2024

publication date

1 January 2003

1 reference

full work available at URL

8 August 2017

https://www.annualreviews.org/doi/pdf/10.1146/annurev.micro.57.030502.090942

1 reference

Crossref

DOI

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Annual Review of Microbiology

18 March 2024

published in

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8 August 2017

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8 August 2017

page(s)

301-322

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Stimulation of bacteriophage T4 middle transcription by the T4 proteins MotA and AsiA occurs at two distinct steps in the transcription cycle

8 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The interaction between the AsiA protein of bacteriophage T4 and the sigma70 subunit of Escherichia coli RNA polymerase

18 March 2024

1 reference

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Domain organization of RNA polymerase alpha subunit: C-terminal 85 amino acids constitute a domain capable of dimerization and DNA binding.

18 March 2024

1 reference

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Phage genomics: small is beautiful

18 March 2024

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Structure of the bacterial RNA polymerase promoter specificity sigma subunit

18 March 2024

1 reference

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Interaction between the phage HK022 Nun protein and the nut RNA of phage lambda

18 March 2024

1 reference

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The bacteriophage T4 AsiA protein: a molecular switch for sigma 70-dependent promoters

18 March 2024

1 reference

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Bacterial promoter architecture: subsite structure of UP elements and interactions with the carboxy-terminal domain of the RNA polymerase alpha subunit

18 March 2024

1 reference

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Abortive initiation of transcription at a hybrid promoter. An analysis of the sliding clamp activator of bacteriophage T4 late transcription, and a comparison of the sigma70 and T4 gp55 promoter recognition proteins

18 March 2024

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Dynamics of DNA-tracking by two sliding-clamp proteins.

18 March 2024

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DNA-binding determinants of the alpha subunit of RNA polymerase: novel DNA-binding domain architecture

18 March 2024

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43 Coliphage-induced ADP-ribosylation of Escherichia coli RNA polymerase

18 March 2024

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Changes in the promoter range of RNA polymerase resulting from bacteriophage T4-induced modification of core enzyme

18 March 2024

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Sigma factors from E. coli, B. subtilis, phage SP01, and phage T4 are homologous proteins

18 March 2024

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The mechanism of intrinsic transcription termination.

18 March 2024

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Control of intrinsic transcription termination by N and NusA: the basic mechanisms

18 March 2024

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A transcriptional enhancer whose function imposes a requirement that proteins track along DNA.

18 March 2024

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An RNA polymerase-binding protein that is required for communication between an enhancer and a promoter

18 March 2024

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“Host Shutoff” Function of Bacteriophage T7: Involvement of T7 Gene 2 and Gene 0.7 in the Inactivation of Escherichia coli RNA Polymerase

18 March 2024

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Phosphorylation of the beta' Subunit of RNA Polymerase and Other Host Proteins upon phiCd1 Infection of Caulobacter crescentus.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The Nun protein of bacteriophage HK022 inhibits translocation of Escherichia coliRNA polymerase without abolishing its catalytic activities

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Bipartite functional map of the E. coli RNA polymerase α subunit: Involvement of the C-terminal region in transcription activation by cAMP-CRP

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Bacteriophage T4 Alc protein: a transcription termination factor sensing local modification of DNA.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Defining a bacteriophage T4 late promoter: bacteriophage T4 gene 55 protein suffices for directing late promoter recognition

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Initiation of transcription at phage T4 late promoters with purified RNA polymerase

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Sigma competition: the contest between bacteriophage T4 middle and late transcription

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The mechanism of transcriptional activation by the topologically DNA-linked sliding clamp of bacteriophage T4.

18 March 2024

1 reference

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Transcriptional arrest: Escherichia coli RNA polymerase translocates backward, leaving the 3' end of the RNA intact and extruded

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

A structural model of transcription elongation

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition.

18 March 2024

1 reference

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Flipping a genetic switch by subunit exchange

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

NMR structure of the bacteriophage lambda N peptide/boxB RNA complex: recognition of a GNRA fold by an arginine-rich motif

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Core-sigma interaction: probing the interaction of the bacteriophage T4 gene 55promoter recognition protein with E.coli RNA polymerase core

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Characterization of phage-Xp10-coded RNA polymerase

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The sigma 70 family: sequence conservation and evolutionary relationships

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Microarray analysis of gene expression during bacteriophage T4 infection.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The complex of T4 bacteriophage gene 44 and 62 replication proteins forms an ATPase that is stimulated by DNA and by T4 gene 45 protein

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

A bipartite bacteriophage T4 SOC and HOC randomized peptide display library: detection and analysis of phage T4 terminase (gp17) and late sigma factor (gp55) interaction.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Restructuring of an RNA polymerase holoenzyme elongation complex by lambdoid phage Q proteins

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Promoter recognition as measured by binding of polymerase to nontemplate strand oligonucleotide

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Function of transcription cleavage factors GreA and GreB at a regulatory pause site

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

RNA polymerase beta' subunit: a target of DNA binding-independent activation

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Mapping the molecular interface between the sigma(70) subunit of E. coli RNA polymerase and T4 AsiA.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Interaction of T4 AsiA with its target sites in the RNA polymerase sigma70 subunit leads to distinct and opposite effects on transcription

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Crystal structure of the DNA polymerase processivity factor of T4 bacteriophage

18 March 2024

1 reference

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Independent ligand-induced folding of the RNA-binding domain and two functionally distinct antitermination regions in the phage lambda N protein

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

A protein-RNA interaction network facilitates the template-independent cooperative assembly on RNA polymerase of a stable antitermination complex containing the lambda N protein

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Purification and characterization of bacteriophage-encoded inhibitors of host RNA polymerase: T-odd phage gp2-like proteins

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Inhibition of Escherichia coli RNA polymerase by bacteriophage T7 gene 2 protein

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

A novel bacteriophage-encoded RNA polymerase binding protein inhibits transcription initiation and abolishes transcription termination by host RNA polymerase

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The sigma(70) subunit of RNA polymerase is contacted by the (lambda)Q antiterminator during early elongation

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Rescue of abortive T7 gene 2 mutant phage infection by rifampin

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The Escherichia coli RNA polymerase.anti-sigma 70 AsiA complex utilizes alpha-carboxyl-terminal domain upstream promoter contacts to transcribe from a -10/-35 promoter

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The asiA gene of bacteriophage T4 codes for the anti-sigma 70 protein

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Bacteriophage T4 MotA and AsiA proteins suffice to direct Escherichia coli RNA polymerase to initiate transcription at T4 middle promoters

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The asiA gene product of bacteriophage T4 is required for middle mode RNA synthesis

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The bacteriophage T4 transcription activator MotA interacts with the far-C-terminal region of the sigma70 subunit of Escherichia coli RNA polymerase

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The bacteriophage T4 anti-sigma factor AsiA is not necessary for the inhibition of early promoters in vivo

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Early T7 gene expression: rates of RNA synthesis and degradation, protein kinase dependent termination of transcription, and efficiency of translation

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Protein Kinase Induction in Escherichia coli by Bacteriophage T7

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Bacteriophage lambda N protein alone can induce transcription antitermination in vitro

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Function of E. coli RNA polymerase sigma factor sigma 70 in promoter-proximal pausing

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Escherichia coli mutations that block transcription termination by phage HK022 Nun protein

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Rules governing the efficiency and polarity of loading a tracking clamp protein onto DNA: determinants of enhancement in bacteriophage T4 late transcription

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Dual targets of a transcriptional activator that tracks on DNA

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Determinants of the C-terminal domain of the Escherichia coli RNA polymerase alpha subunit important for transcription at class I cyclic AMP receptor protein-dependent promoters

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

A non-essential domain of Escherichia coli RNA polymerase required for the action of the termination factor Alc.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Inhibition of Escherichia coli RNA polymerase by bacteriophage T4 AsiA.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Relationships among different strains of T7 and among T7-related bacteriophages

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

A zinc finger-like domain of the molecular chaperone DnaJ is involved in binding to denatured protein substrates.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Detecting the ability of viral, bacterial and eukaryotic replication proteins to track along DNA.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The COOH-terminal domain of the RNA polymerase alpha subunit in transcriptional enhancement and deactivation at the bacteriophage T4 late promoter

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Transcriptional activation by a DNA-tracking protein: structural consequences of enhancement at the T4 late promoter

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

A direct interaction between a DNA-tracking protein and a promoter recognition protein: implications for searching DNA sequence.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Conserved regions 4.1 and 4.2 of sigma(70) constitute the recognition sites for the anti-sigma factor AsiA, and AsiA is a dimer free in solution

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Solution structure and stability of the anti-sigma factor AsiA: implications for novel functions

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Binding of transcription termination protein nun to nascent RNA and template DNA.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Genes that protect against the host-killing activity of the E3 protein of Bacillus subtilis bacteriophage SPO1.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Interactions of the bacteriophage T4 gene 55 product with Escherichia coli RNA polymerase. Competition with Escherichia coli sigma 70 and release from late T4 transcription complexes following initiation.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Overproduced bacteriophage T4 gene 33 protein binds RNA polymerase

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Activator-sigma interaction: A hydrophobic segment mediates the interaction of a sigma family promoter recognition protein with a sliding clamp transcription activator.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Mutational and functional analysis of a segment of the sigma family bacteriophage T4 late promoter recognition protein gp55.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Gene Q antiterminator proteins of Escherichia coli phages 82 and lambda suppress pausing by RNA polymerase at a rho-dependent terminator and at other sites

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

The phage lambda gene Q transcription antiterminator binds DNA in the late gene promoter as it modifies RNA polymerase

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Mutations in and monoclonal antibody binding to evolutionary hypervariable region of Escherichia coli RNA polymerase beta' subunit inhibit transcript cleavage and transcript elongation

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.

18 March 2024

1 reference

https://api.crossref.org/works/10.1146/ANNUREV.MICRO.57.030502.090942

18 March 2024

Identifiers

DOI

1 reference

8 August 2017

1 reference