Defects in RNA quality control factors reveal RNAi-independent nucleation of heterochromatin. (Q35301089)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21892171%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

title

Defects in RNA quality control factors reveal RNAi-independent nucleation of heterochromatin (English)

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12 February 2020

0 references

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12 February 2020

author name string

Francisca E Reyes-Turcu

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12 February 2020

Ke Zhang

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12 February 2020

Martin Zofall

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12 February 2020

Eesin Chen

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12 February 2020

publication date

4 September 2011

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Nature Structural & Molecular Biology

12 February 2020

published in

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12 February 2020

volume

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12 February 2020

issue

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12 February 2020

page(s)

1132-1138

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Asf1/HIRA Facilitate Global Histone Deacetylation and Associate with HP1 to Promote Nucleosome Occupancy at Heterochromatic Loci

12 February 2020

cites work

1 reference

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The Chromatin Signaling Pathway: Diverse Mechanisms of Recruitment of Histone-Modifying Enzymes and Varied Biological Outcomes

12 July 2018

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Continuous requirement for the Clr4 complex but not RNAi for centromeric heterochromatin assembly in fission yeast harboring a disrupted RITS complex

12 July 2018

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12 July 2018

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Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription.

12 July 2018

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HP1 recruitment in the absence of argonaute proteins in Drosophila

12 July 2018

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Stc1: a critical link between RNAi and chromatin modification required for heterochromatin integrity.

12 July 2018

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Dicer-independent primal RNAs trigger RNAi and heterochromatin formation

12 July 2018

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Hairpin RNA induces secondary small interfering RNA synthesis and silencing in trans in fission yeast

12 July 2018

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Interaction of RNA polymerase II and the small RNA machinery affects heterochromatic silencing in Drosophila

12 July 2018

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Histone H2A.Z cooperates with RNAi and heterochromatin factors to suppress antisense RNAs

12 July 2018

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Lessons from X-chromosome inactivation: long ncRNA as guides and tethers to the epigenome

12 July 2018

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Diverse roles of HP1 proteins in heterochromatin assembly and functions in fission yeast.

12 July 2018

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High-Affinity Binding of Chp1 Chromodomain to K9 Methylated Histone H3 Is Required to Establish Centromeric Heterochromatin

12 July 2018

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Evolution and functions of long noncoding RNAs

12 July 2018

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12 July 2018

The centrality of RNA.

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HP1 proteins form distinct complexes and mediate heterochromatic gene silencing by nonoverlapping mechanisms

12 July 2018

1 reference

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Splicing factors facilitate RNAi-directed silencing in fission yeast

12 July 2018

1 reference

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siRNA-mediated heterochromatin establishment requires HP1 and is associated with antisense transcription

12 July 2018

1 reference

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Reversal of RNA polymerase II ubiquitylation by the ubiquitin protease Ubp3.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

RNA interference guides histone modification during the S phase of chromosomal replication.

12 July 2018

1 reference

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RNA immunoprecipitation for determining RNA-protein associations in vivo

12 July 2018

1 reference

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Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

Global role for polyadenylation-assisted nuclear RNA degradation in posttranscriptional gene silencing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

Epigenetic control of centromere behavior

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

Epigenetic inheritance in plants.

12 July 2018

1 reference

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Transcription and RNA interference in the formation of heterochromatin.

12 July 2018

1 reference

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Cotranscriptional processes and their influence on genome stability.

12 July 2018

1 reference

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RNA-quality control by the exosome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

RNA Pol II subunit Rpb7 promotes centromeric transcription and RNAi-directed chromatin silencing

12 July 2018

1 reference

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Homolog of BRCA2-interacting Dss1p and Uap56p link Mlo3p and Rae1p for mRNA export in fission yeast

12 July 2018

1 reference

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RNAi-mediated pathways in the nucleus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

RNA-dependent RNA polymerase is an essential component of a self-enforcing loop coupling heterochromatin assembly to siRNA production

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

A chromodomain protein, Chp1, is required for the establishment of heterochromatin in fission yeast.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

Cotranscriptionally Formed DNA:RNA Hybrids Mediate Transcription Elongation Impairment and Transcription-Associated Recombination

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

Dicer is required for chromosome segregation and gene silencing in fission yeast cells.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

Interactions between mRNA export commitment, 3'-end quality control, and nuclear degradation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

TREX is a conserved complex coupling transcription with messenger RNA export

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

Quality control of mRNA 3'-end processing is linked to the nuclear exosome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

Translating the Histone Code

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

TFIIS enhances transcriptional elongation through an artificial arrest site in vivo

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

RNA polymerase II elongation through chromatin

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

A Recombinationally Repressed Region Between mat2 and mat3 Loci Shares Homology to Centromeric Repeats and Regulates Directionality of Mating-Type Switching in Fission Yeast

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

Isolation and characterization of the Schizosaccharomyces pombe gene encoding transcript elongation factor TFIIS.

12 July 2018

1 reference

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Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

Cell cycle control of centromeric repeat transcription and heterochromatin assembly

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing.

26 September 2018

1 reference

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The nucleation and maintenance of heterochromatin by a histone deacetylase in fission yeast.

26 September 2018

1 reference

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RNA Polymerase II Is Required for RNAi-Dependent Heterochromatin Assembly

26 September 2018

1 reference

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DNA methylation is independent of RNA interference in Neurospora

26 September 2018

1 reference

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Establishment and maintenance of a heterochromatin domain

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190054

SUMOylation promotes de novo targeting of HP1α to pericentric heterochromatin

26 September 2018

1 reference

Comprehensive analysis of heterochromatin- and RNAi-mediated epigenetic control of the fission yeast genome

21 January 2018

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SHREC, an effector complex for heterochromatic transcriptional silencing

31 March 2020

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RNAi-dependent and -independent RNA turnover mechanisms contribute to heterochromatic gene silencing

31 March 2020

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Centromeres become unstuck without heterochromatin

31 March 2020

1 reference

Clr4/Suv39 and RNA quality control factors cooperate to trigger RNAi and suppress antisense RNA.

31 March 2020

1 reference

31 March 2020

Identifiers

DOI

10.1038/NSMB.2122

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21892171%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21892171%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

PubMed publication ID

21892171

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21892171%20AND%20SRC:MED&resulttype=core&format=json