Diversity of operation in ATP-dependent chromatin remodelers (Q35209444)

7 August 2017

1 reference

title

Diversity of operation in ATP-dependent chromatin remodelers (English)

1 reference

chromatin assembly or disassembly

7 August 2017

main subject

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21616185

3 December 2024

Swetansu K. Hota

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21616185

3 December 2024

Blaine Bartholomew

1 reference

7 August 2017

language of work or name

English

0 references

publication date

15 May 2011

1 reference

full work available at URL

7 August 2017

https://europepmc.org/articles/pmc3171594?pdf=render

file format

Portable Document Format

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21616185

https://europepmc.org/articles/PMC3171594

3 December 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21616185

https://europepmc.org/articles/PMC3171594?pdf=render

3 December 2024

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21616185

https://doi.org/10.1016/j.bbagrm.2011.05.007

3 December 2024

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21616185

https://api.elsevier.com/content/article/PII:S1874939911000745?httpAccept=text/xml

3 December 2024

1 reference

10.1016/J.BBAGRM.2011.05.007

Crossref

DOI

https://api.crossref.org/works/10.1016/J.BBAGRM.2011.05.007

https://api.elsevier.com/content/article/PII:S1874939911000745?httpAccept=text/plain

3 December 2024

1 reference

10.1016/J.BBAGRM.2011.05.007

Crossref

DOI

https://api.crossref.org/works/10.1016/J.BBAGRM.2011.05.007

Biochimica et Biophysica Acta

3 December 2024

published in

1 reference

7 August 2017

volume

1809

1 reference

7 August 2017

1 reference

7 August 2017

page(s)

476-487

1 reference

The INO80 ATP-dependent chromatin remodeling complex is a nucleosome spacing factor

7 August 2017

cites work

1 reference

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The docking domain of histone H2A is required for H1 binding and RSC-mediated nucleosome remodeling.

28 July 2018

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Human ISWI chromatin-remodeling complexes sample nucleosomes via transient binding reactions and become immobilized at active sites

28 July 2018

1 reference

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SWI/SNF has intrinsic nucleosome disassembly activity that is dependent on adjacent nucleosomes

28 July 2018

1 reference

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Chromatin remodelling during development

28 July 2018

1 reference

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Dynamics of nucleosome remodelling by individual ACF complexes

28 July 2018

1 reference

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The chromatin remodeller ACF acts as a dimeric motor to space nucleosomes

28 July 2018

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A method for genetically installing site-specific acetylation in recombinant histones defines the effects of H3 K56 acetylation

28 July 2018

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Conformational changes associated with template commitment in ATP-dependent chromatin remodeling by ISW2

28 July 2018

1 reference

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Analysis of individual remodeled nucleosomes reveals decreased histone-DNA contacts created by hSWI/SNF.

28 July 2018

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The incorporation of the novel histone variant H2AL2 confers unusual structural and functional properties of the nucleosome

28 July 2018

1 reference

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ATP-dependent looping of DNA by ISWI.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Structure of a RSC-nucleosome complex and insights into chromatin remodeling

28 July 2018

1 reference

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Architecture of the SWI/SNF-nucleosome complex

28 July 2018

1 reference

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Nucleosome retention and the stochastic nature of promoter chromatin remodeling for transcription

28 July 2018

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ATP-dependent chromatin remodeling enzymes: two heads are not better, just different

28 July 2018

1 reference

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Chromatin remodelling at promoters suppresses antisense transcription

28 July 2018

1 reference

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Chromatin remodeling: insights and intrigue from single-molecule studies

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Domain architecture of the catalytic subunit in the ISW2-nucleosome complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

DNA sequence- and conformation-directed positioning of nucleosomes by chromatin-remodeling complexes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

FRET-based methods to study ATP-dependent changes in chromatin structure

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

DNA translocation and loop formation mechanism of chromatin remodeling by SWI/SNF and RSC.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Regulation of ISW2 by concerted action of histone H4 tail and extranucleosomal DNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Dissection of the unusual structural and functional properties of the variant H2A.Bbd nucleosome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Antagonistic forces that position nucleosomes in vivo.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Analysis of nucleosome repositioning by yeast ISWI and Chd1 chromatin remodeling complexes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Direct observation of DNA distortion by the RSC complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Acetylation in histone H3 globular domain regulates gene expression in yeast.

28 July 2018

1 reference

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X-Ray Structures of the Sulfolobus solfataricus SWI2/SNF2 ATPase Core and Its Complex with DNA

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Genome-wide identification of Isw2 chromatin-remodeling targets by localization of a catalytically inactive mutant

28 July 2018

1 reference

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Structure of the SWI2/SNF2 chromatin-remodeling domain of eukaryotic Rad54

28 July 2018

1 reference

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Chromatin remodeling by DNA bending, not twisting

28 July 2018

1 reference

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Evidence for histone eviction in trans upon induction of the yeast PHO5 promoter

28 July 2018

1 reference

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Reaction cycle of the yeast Isw2 chromatin remodeling complex.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Topography of the ISW2-nucleosome complex: insights into nucleosome spacing and chromatin remodeling

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Chromatin remodeling by RNA polymerases

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Electron microscopic analysis of the RSC chromatin remodeling complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Histone H2A/H2B dimer exchange by ATP-dependent chromatin remodeling activities

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Dynamic Properties of Nucleosomes during Thermal and ATP-Driven Mobilization

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Crystal structure and functional analysis of a nucleosome recognition module of the remodeling factor ISWI

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

High-resolution mapping of changes in histone-DNA contacts of nucleosomes remodeled by ISW2

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Modulation of ISWI function by site-specific histone acetylation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

A critical epitope for substrate recognition by the nucleosome remodeling ATPase ISWI.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

NoRC--a novel member of mammalian ISWI-containing chromatin remodeling machines

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Critical role for the histone H4 N terminus in nucleosome remodeling by ISWI.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Characterization of the imitation switch subfamily of ATP-dependent chromatin-remodeling factors in Saccharomyces cerevisiae

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Homologous pairing in stretched supercoiled DNA

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Crystal structure of the nucleosome core particle at 2.8 Å resolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

A highly basic histone H4 domain bound to the sharply bent region of nucleosomal DNA

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

The Chromodomains of the Chd1 Chromatin Remodeler Regulate DNA Access to the ATPase Motor

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Nucleosomes can invade DNA territories occupied by their neighbors

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

The Dpb4 subunit of ISW2 is anchored to extranucleosomal DNA.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Conformational flexibility in the chromatin remodeler RSC observed by electron microscopy and the orthogonal tilt reconstruction method

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Dependency of ISW1a chromatin remodeling on extranucleosomal DNA.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

The chromatin-remodeling enzyme ACF is an ATP-dependent DNA length sensor that regulates nucleosome spacing

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

The N-CoR complex enables chromatin remodeler SNF2H to enhance repression by thyroid hormone receptor

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Chromatin remodeling through directional DNA translocation from an internal nucleosomal site

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Functional role of extranucleosomal DNA and the entry site of the nucleosome in chromatin remodeling by ISW2.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Spatial contacts and nucleosome step movements induced by the NURF chromatin remodeling complex

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Removal of promoter nucleosomes by disassembly rather than sliding in vivo

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Site-directed histone-DNA contact mapping for analysis of nucleosome dynamics

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Nucleosomes unfold completely at a transcriptionally active promoter

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

SWI/SNF unwraps, slides, and rewraps the nucleosome

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Dynamics of ATP-dependent chromatin assembly by ACF.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Nucleosome remodeling induced by RNA polymerase II: loss of the H2A/H2B dimer during transcription.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Single-molecule analysis of DNA uncoiling by a type II topoisomerase.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3171594

Human ACF1 alters the remodeling strategy of SNF2h

26 September 2018

1 reference

12 December 2020

Variant histone H2A.Z, but not the HMG proteins Nhp6a/b, is essential for the recruitment of Swi/Snf, Mediator, and SAGA to the yeast GAL1 UAS(G)

1 reference

12 December 2020

Footprinting protein-DNA complexes using the hydroxyl radical

1 reference

12 December 2020

Diverse regulation of SNF2h chromatin remodeling by noncatalytic subunits

1 reference

12 December 2020

10.1016/J.BBAGRM.2011.05.007

Identifiers

DOI

1 reference

release_zavqmk3b5fdxlazp3fzbpj7bnu

7 August 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/zavqmk3b5fdxlazp3fzbpj7bnu

24 November 2022

mapped directly with Wikidata item

PMC publication ID

3171594

1 reference

7 August 2017

1 reference