Detection, sequence patterns and function of unusual DNA structures (Q35055970)

6 August 2017

title

Detection, sequence patterns and function of unusual DNA structures (English)

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6 August 2017

Anderson JN

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6 August 2017

language of work or name

English

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publication date

1 November 1986

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6 August 2017

published in

Nucleic Acids Research

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6 August 2017

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6 August 2017

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6 August 2017

page(s)

8513-8533

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Nucleosomes will not form on double-stranded RNa or over poly(dA).poly(dT) tracts in recombinant DNA.

6 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

The pitch of chromatin DNA is reflected in its nucleotide sequence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Chain flexibility and hydrodynamics of the B and Z forms of poly(dG-dC).poly(dG-dC).

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Deletion mutations affecting autonomously replicating sequence ARS1 of Saccharomyces cerevisiae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Nucleosome reconstitution on plasmid-inserted poly(dA) . poly(dT)

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

The locus of sequence-directed and protein-induced DNA bending

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Characterization of human chromosomal DNA sequences which replicate autonomously in Saccharomyces cerevisiae.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Differential hormonal responsiveness of the ovalbumin gene and its pseudogenes in the chick oviduct

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

The inverted repeat as a recognizable structural feature in supercoiled DNA molecules

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Sequence of a yeast DNA fragment containing a chromosomal replicator and the TRP1 gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Chromatin conformation of yeast centromeres

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Organization of the higher-order chromatin loop: specific DNA attachment sites on nuclear scaffold

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Evidence for the existence of stable curvature of DNA in solution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Role of molecular conformation in determining the electrophoretic properties of polynucleotides in agarose-acrylamide composite gels

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Sequence dependence of the curvature of DNA: a test of the phasing hypothesis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Reconstitution experiments show that sequence-specific histone-DNA interactions are the basis for nucleosome phasing on mouse satellite DNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

DNA bending at adenine . thymine tracts

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Structural wrinkles and the genomic regulatory sites of eukaryotes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

DNA bending and its relation to nucleosome positioning.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

The structure and function of yeast centromeres

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Permanent attachment of replication origins to the nuclear matrix in BHK-cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Chromosomal loop anchorage of the kappa immunoglobulin gene occurs next to the enhancer in a region containing topoisomerase II sites

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: a model system for study of higher order structure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Sequence-induced DNA curvature at the bacteriophage lambda origin of replication

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

An equilibrium between distorted and undistorted DNA in the adult chicken beta A-globin gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

The adenovirus type 5 E1A enhancer contains two functionally distinct domains: one is specific for E1A and the other modulates all early units in cis.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Chain length determination of small double- and single-stranded DNA molecules by polyacrylamide gel electrophoresis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Nucleosome cores reconstituted from poly (dA-dT) and the octamer of histones

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Chromatin and core particles formed from the inner histones and synthetic polydeoxyribonucleotides of defined sequence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Isolation and characterisation of a yeast chromosomal replicator

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Isolation of maxicircle component of kinetoplast DNA from hemoflagellate protozoa

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Preferential in vitro assembly of nucleosome cores on some AT-rich regions of SV40 DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Nucleotide sequence comparisons and functional analysis of yeast centromere DNAs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

The adenovirus type 5 E1A transcriptional control region contains a duplicated enhancer element

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Evolutionary implications of a complex pattern of DNA sequence homology extending far upstream of the hsp70 genes at loci 87A7 and 87C1 in Drosophila melanogaster

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Structural requirements for the function of a yeast chromosomal replicator

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Anomalous electrophoresis of deoxyribonucleic acid restriction fragments on polyacrylamide gels

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311874

Viral DNA sequences from incomplete particles of human adenovirus type 7

25 October 2018

1 reference

12 December 2020

Heterogeneity of minicircles in kinetoplast DNA of Leishmania tarentolae

1 reference

12 December 2020

Encapsidation of adenovirus 16 DNA is directed by a small DNA sequence at the left end of the genome

1 reference

12 December 2020

Phasing of Nucleosomes in SV40 Chromatin Reconstituted In Vitro1

1 reference

12 December 2020

An altered DNA conformation detected by S1 nuclease occurs at specific regions in active chick globin chromatin

1 reference

12 December 2020

Specific alignment of nucleosomes on DNA correlates with periodic distribution of purine-pyrimidine and pyrimidine-purine dimers

1 reference

12 December 2020

Molecular biology: Anatomy of hypersensitive sites

1 reference

12 December 2020

Nucleosome “phasing” and cruciform structures in circular supercoiled pBR322 DNA

1 reference

12 December 2020

Physical characterization of a kinetoplast DNA fragment with unusual properties

1 reference

12 December 2020

Adenovirus DNA replication

1 reference

12 December 2020

On the sequence determinants and flexibility of the kinetoplast DNA fragment with abnormal gel electrophoretic mobilities

1 reference

12 December 2020

An altered DNA conformation in origin region I is a determinant for the binding of SV40 large T antigen

1 reference

12 December 2020

The relationship between chromosomal origins of replication and the nuclear matrix during the cell cycle

1 reference

12 December 2020

DNA bending induced by cruciform formation

1 reference

12 December 2020

Role of base composition in the electrophoresis of microbial and crab DNA in polyacrylamide gels

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/14.21.8513

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6 August 2017

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6 August 2017

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