Digital genotyping of sorghum - a diverse plant species with a large repeat-rich genome (Q34799922)

4 August 2017

title

Digital genotyping of sorghum - a diverse plant species with a large repeat-rich genome (English)

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4 August 2017

1 reference

Daryl T Morishige

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4 August 2017

Patricia E Klein

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4 August 2017

Josie L Hilley

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4 August 2017

Sayed Mohammad Ebrahim Sahraeian

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4 August 2017

Arun Sharma

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4 August 2017

John E Mullet

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4 August 2017

language of work or name

English

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publication date

5 July 2013

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4 August 2017

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4 August 2017

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4 August 2017

page(s)

448

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Coincident light and clock regulation of pseudoresponse regulator protein 37 (PRR37) controls photoperiodic flowering in sorghum

4 August 2017

cites work

1 reference

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Genome-wide genetic marker discovery and genotyping using next-generation sequencing

8 July 2018

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A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

8 July 2018

1 reference

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MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes

8 July 2018

1 reference

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Parent-independent genotyping for constructing an ultrahigh-density linkage map based on population sequencing.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

The Sorghum bicolor genome and the diversification of grasses

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

A large genome center's improvements to the Illumina sequencing system

8 July 2018

1 reference

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Accurate whole human genome sequencing using reversible terminator chemistry

8 July 2018

1 reference

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Rapid SNP discovery and genetic mapping using sequenced RAD markers

8 July 2018

1 reference

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Complexity reduction of polymorphic sequences (CRoPS): a novel approach for large-scale polymorphism discovery in complex genomes

8 July 2018

1 reference

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Genome-wide in situ exon capture for selective resequencing

8 July 2018

1 reference

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Domestication to Crop Improvement: Genetic Resources for Sorghum and Saccharum (Andropogoneae)

8 July 2018

1 reference

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Plastid transcription activity and DNA copy number increase early in barley chloroplast development

8 July 2018

1 reference

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Utilization of the three high-throughput SNP genotyping methods, the GOOD assay, Amplifluor and TaqMan, in diploid and polyploid plants

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

Comprehensive molecular cytogenetic analysis of sorghum genome architecture: distribution of euchromatin, heterochromatin, genes and recombination in comparison to rice.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

Genome sequencing in microfabricated high-density picolitre reactors

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

Sorghum genome sequencing by methylation filtration

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

Genome evolution in the genus Sorghum (Poaceae)

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

SNPWave: a flexible multiplexed SNP genotyping technology

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

Large-scale discovery of induced point mutations with high-throughput TILLING.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

Full flexibility genotyping of single nucleotide polymorphisms by the GOOD assay

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

Protection of DNA during preparative agarose gel electrophoresis against damage induced by ultraviolet light

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

AFLP: a new technique for DNA fingerprinting

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

Construction of a genetic linkage map in man using restriction fragment length polymorphisms

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

Why do chloroplasts and mitochondria contain so many copies of their genome?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

Whole-genome genotyping with the single-base extension assay

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

A genome-wide scalable SNP genotyping assay using microarray technology

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

Loss of an MDR transporter in compact stalks of maize br2 and sorghum dw3 mutants.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716661

A high-density genetic map of Sorghum bicolor (L.) Moench based on 2926 AFLP, RFLP and SSR markers

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23829350

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-14-448

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4 August 2017

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4 August 2017

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