Multiple protein-DNA interactions over the yeast HSC82 heat shock gene promoter (Q34752109)

4 August 2017

title

Multiple protein-DNA interactions over the yeast HSC82 heat shock gene promoter (English)

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4 August 2017

A M Erkine

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4 August 2017

C C Adams

series ordinal

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4 August 2017

M Gao

series ordinal

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4 August 2017

D S Gross

series ordinal

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4 August 2017

language of work or name

English

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publication date

1 May 1995

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4 August 2017

published in

Nucleic Acids Research

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4 August 2017

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4 August 2017

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4 August 2017

page(s)

1822-1829

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Multiple functions of nucleosomes and regulatory factors in transcription

4 August 2017

cites work

1 reference

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A critical role for heat shock transcription factor in establishing a nucleosome-free region over the TATA-initiation site of the yeast HSP82 heat shock gene.

7 July 2018

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7 July 2018

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7 July 2018

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Sequences That Regulate the Divergent GAL1-GAL10 Promoter in Saccharomyces cerevisiae

7 July 2018

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7 July 2018

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7 July 2018

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Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements.

7 July 2018

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Statistical distributions of nucleosomes: nonrandom locations by a stochastic mechanism

7 July 2018

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Determinants for the DNase I-hypersensitive chromatin structure 5' to a human HSP70 gene.

7 July 2018

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Key features of heat shock regulatory elements

7 July 2018

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Germline transformation used to define key features of heat-shock response elements.

7 July 2018

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The Saccharomyces and Drosophila heat shock transcription factors are identical in size and DNA binding properties

7 July 2018

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Statistical positioning of nucleosomes by specific protein-binding to an upstream activating sequence in yeast

7 July 2018

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A highly conserved sequence in yeast heat shock gene promoters

7 July 2018

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Constitutive binding of yeast heat shock factor to DNA in vivo

7 July 2018

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Nuclease hypersensitive sites in chromatin

7 July 2018

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Nucleosomal instability and induction of new upstream protein-DNA associations accompany activation of four small heat shock protein genes in Drosophila melanogaster

7 July 2018

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Supercoiling of the DNA template during transcription

7 July 2018

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Basal-level expression of the yeast HSP82 gene requires a heat shock regulatory element

7 July 2018

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hsp82 is an essential protein that is required in higher concentrations for growth of cells at higher temperatures

7 July 2018

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Upstream activation sequence-dependent alteration of chromatin structure and transcription activation of the yeast GAL1-GAL10 genes

7 July 2018

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A yeast protein that influences the chromatin structure of UASG and functions as a powerful auxiliary gene activator

7 July 2018

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Role of trans-activating proteins in the generation of active chromatin at the PHO5 promoter in S. cerevisiae.

7 July 2018

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The structure and assembly of active chromatin

7 July 2018

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Genomic footprinting of the yeast HSP82 promoter reveals marked distortion of the DNA helix and constitutive occupancy of heat shock and TATA elements

7 July 2018

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Nucleosome positioning modulates accessibility of regulatory proteins to the mouse mammary tumor virus promoter

7 July 2018

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A cis-acting element present in multiple genes serves as a repressor protein binding site for the yeast CAR1 gene

7 July 2018

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Structural changes in nucleosomes during transcription: strip, split or flip?

7 July 2018

1 reference

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Direct sequence and footprint analysis of yeast DNA by primer extension.

7 July 2018

1 reference

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Transcription-induced nucleosome 'splitting': an underlying structure for DNase I sensitive chromatin

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306942

Positive DNA supercoiling generates a chromatin conformation characteristic of highly active genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306942

The yeast heat shock response is induced by conversion of cells to spheroplasts and by potent transcriptional inhibitors

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306942

Transcription factor access is mediated by accurately positioned nucleosomes on the mouse mammary tumor virus promoter.

7 July 2018

1 reference

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Effect of transcription of yeast chromatin on DNA topology in vivo

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306942

Uncoupling gene activity from chromatin structure: promoter mutations can inactivate transcription of the yeast HSP82 gene without eliminating nucleosome-free regions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306942

What happens to nucleosomes during transcription?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306942

Selective digestion of transcriptionally active ovalbumin genes from oviduct nuclei

7 July 2018

1 reference

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Chromosomal subunits in active genes have an altered conformation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306942

Quantitative analysis of the digestion of yeast chromatin by staphylococcal nuclease

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306942

DNAase footprinting a simple method for the detection of protein-DNA binding specificity

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306942

Nucleosome disruption by transcription factor binding in yeast.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306942

The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I.

26 October 2018

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Local protein–DNA interactions may determine nucleosome positions on yeast plasmids

26 October 2018

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12 December 2020

Chromatin structure of the 5' flanking region of the yeast LEU2 gene

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12 December 2020

Sharp boundaries demarcate the chromatin structure of a yeast heat-shock gene

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12 December 2020

Heat shock factor is regulated differently in yeast and HeLa cells

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12 December 2020

The formation and function of DNase I hypersensitive sites in the process of gene activation

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12 December 2020

DNA sequence elements required for transcription initiation of the Schizosaccharomyces pombe ADH gene in Saccharomyces cerevisiae

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12 December 2020

Non-random cleavage of SV40 DNA in the compact minichromosome and free in solution by micrococcal nuclease

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12 December 2020

The regulation of yeast mating-type chromatin structure by SIR: An action at a distance affecting both transcription and transposition

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12 December 2020

DNA melting on yeast RNA polymerase II promoters

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12 December 2020

Identifiers

DOI

10.1093/NAR/23.10.1822

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4 August 2017

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4 August 2017

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