Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina. (Q34746672)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

title

Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

1 reference

Acaryochloris marina

1 reference

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Wesley D Swingley

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Min Chen

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Patricia C Cheung

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Amber L Conrad

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Liza C Dejesa

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Jicheng Hao

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Barbara M Honchak

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Lauren E Karbach

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Ahmet Kurdoglu

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Stephen D Mastrian

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Hideaki Miyashita

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Lawrence Page

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Pushpa Ramakrishna

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Soichirou Satoh

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

W Matthew Sattley

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Heather L Taylor

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Tohru Tsuchiya

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Zi T Wang

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Jason Raymond

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Mamoru Mimuro

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Robert E Blankenship

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

Jeffrey W Touchman

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

language of work or name

English

0 references

publication date

5 February 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

2 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

volume

105

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

page(s)

2005-2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

Function of chlorophyll d in reaction centers of photosystems I and II of the oxygenic photosynthesis of Acaryochloris marina

2 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Identification of a fourth family of lycopene cyclases in photosynthetic bacteria

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

The genome of Syntrophus aciditrophicus: life at the thermodynamic limit of microbial growth

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Identification of the special pair of photosystem II in a chlorophyll d-dominated cyanobacterium.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Ultrastructural and genetic characteristics of endolithic cyanobacterial biofilms colonizing Antarctic granite rocks

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Molecular detection of epiphytic Acaryochloris spp. on marine macroalgae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Epilithic and endolithic bacterial communities in limestone from a Maya archaeological site

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Effect of iron on growth and ultrastructure of Acaryochloris marina

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Photosynthetic apparatus of antenna-reaction centres supercomplexes in oxyphotobacteria: insight through significance of Pcb/IsiA proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Elucidation of the molecular structures of components of the phycobilisome: reconstructing a giant

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Ecology: a niche for cyanobacteria containing chlorophyll d.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Discovery of a free-living chlorophyll d-producing cyanobacterium with a hybrid proteobacterial/cyanobacterial small-subunit rRNA gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Unique constitution of photosystem I with a novel subunit in the cyanobacterium Gloeobacter violaceus PCC 7421.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Recombinational DNA repair: the ignored repair systems

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Circular genome visualization and exploration using CGView

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

The evolution of A-, F-, and V-type ATP synthases and ATPases: reversals in function and changes in the H+/ATP coupling ratio

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Structure and function of radical SAM enzymes.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Adaptation of the photosynthetic electron transport chain in cyanobacteria to iron deficiency: The function of IdiA and IsiA.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Trends between gene content and genome size in prokaryotic species with larger genomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

The genome of a motile marine Synechococcus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Structure of a photosystem II supercomplex isolated from Prochloron didemni retaining its chlorophyll a/b light-harvesting system.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

A novel type of lycopene ε-cyclase in the marine cyanobacterium Prochlorococcus marinus MED4

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

An efficient algorithm for large-scale detection of protein families

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Roles of DNA polymerases V and II in SOS-induced error-prone and error-free repair in Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Multiplication of antenna genes as a major adaptation to low light in a marine prokaryote

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

A photosystem I reaction center driven by chlorophyll d in oxygenic photosynthesis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Chlorophyll a oxygenase (CAO) is involved in chlorophyll b formation from chlorophyll a

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Isolation and characterization of biliprotein aggregates from Acaryochloris marina, a Prochloron‐like prokaryote containing mainly chlorophyll d

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Sequence Analysis of the Genome of the Unicellular Cyanobacterium Synechocystis sp. Strain PCC6803. II. Sequence Determination of the Entire Genome and Assignment of Potential Protein-coding Regions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Molecular structure and enzymatic function of lycopene cyclase from the cyanobacterium Synechococcus sp strain PCC7942.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Two recA genes in Myxococcus xanthus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Basic local alignment search tool

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538872

Chlorophyll d in an epiphytic cyanobacterium of red algae

7 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709772105

Structure of the rotor ring of F-Type Na+-ATPase from Ilyobacter tartaricus

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709772105

Chromatic photoacclimation, photosynthetic electron transport and oxygen evolution in the chlorophyll d-containing oxyphotobacterium Acaryochloris marina

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709772105

Identification of a vinyl reductase gene for chlorophyll synthesis in Arabidopsis thaliana and implications for the evolution of Prochlorococcus species

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709772105

Nomenclature for membrane-bound light-harvesting complexes of cyanobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709772105

The major light-harvesting pigment protein of Acaryochloris marina.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709772105

Unique origin and lateral transfer of prokaryotic chlorophyll-b and chlorophyll-d light-harvesting systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709772105

Influence of structure on binding of chlorophylls to peptide ligands

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709772105

ACARYOCHLORIS MARINA GEN. ET SP. NOV. (CYANOBACTERIA), AN OXYGENIC PHOTOSYNTHETIC PROKARYOTE CONTAINING CHL D AS A MAJOR PIGMENT1

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709772105

Chlorophyll d as a major pigment

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0709772105

Structure of a large photosystem II supercomplex from Acaryochloris marina

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18252824

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Characterization of the water oxidizing complex of photosystem II of the Chl d-containing cyanobacterium Acaryochloris marina via its reactivity towards endogenous electron donors and acceptors

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18252824

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0709772105

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

PubMed publication ID

18252824

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18252824%20AND%20SRC:MED&resulttype=core&format=json