Robust estimation of microbial diversity in theory and in practice. (Q34585241)

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23 February 2020

title

Robust estimation of microbial diversity in theory and in practice (English)

1 reference

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23 February 2020

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1 reference

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23 February 2020

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23 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23407313%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

Jonathan Dushoff

1 reference

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23 February 2020

Joshua S Weitz

1 reference

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23 February 2020

Bart Haegeman

1 reference

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23 February 2020

publication date

14 February 2013

1 reference

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23 February 2020

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23 February 2020

volume

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23 February 2020

issue

1 reference

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23 February 2020

page(s)

1092-1101

1 reference

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How many species are there on Earth and in the ocean?

23 February 2020

cites work

1 reference

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Genomic fluidity: an integrative view of gene diversity within microbial populations

7 July 2018

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Multivariate Cutoff Level Analysis (MultiCoLA) of large community data sets

7 July 2018

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Bacterial diversity in aquatic and other environments: what 16S rDNA libraries can tell us.

7 July 2018

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Sufficient sampling for asymptotic minimum species richness estimators

7 July 2018

1 reference

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The rational exploration of microbial diversity

7 July 2018

1 reference

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It's all relative: ranking the diversity of aquatic bacterial communities

7 July 2018

1 reference

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Microbial biogeography: from taxonomy to traits

7 July 2018

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The tragedy of the uncommon: understanding limitations in the analysis of microbial diversity

7 July 2018

1 reference

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Pyrosequencing enumerates and contrasts soil microbial diversity

7 July 2018

1 reference

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Microbial population structures in the deep marine biosphere

7 July 2018

1 reference

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How Many Species Are There on Earth?

7 July 2018

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Stability and diversity of ecosystems

7 July 2018

1 reference

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Global patterns in bacterial diversity

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3660670

The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

7 July 2018

1 reference

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Ecology. Dipping into the rare biosphere.

7 July 2018

1 reference

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Phylogenetic clustering and overdispersion in bacterial communities

7 July 2018

1 reference

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Microbial diversity in the deep sea and the underexplored "rare biosphere"

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3660670

Toward a census of bacteria in soil

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3660670

Marine microbial diversity: can it be determined?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3660670

Predicting microbial species richness

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3660670

Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome"

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3660670

Computational improvements reveal great bacterial diversity and high metal toxicity in soil

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3660670

Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3660670

New approaches to analyzing microbial biodiversity data

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3660670

Statistical analysis of denaturing gel electrophoresis (DGE) fingerprinting patterns

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3660670

Estimating prokaryotic diversity and its limits

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3660670

Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology

7 July 2018

2 references

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7 July 2018

https://api.crossref.org/works/10.1038%2FISMEJ.2013.10

Biodiversity and ecosystem functioning: current knowledge and future challenges

21 January 2018

1 reference

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Counting the uncountable: statistical approaches to estimating microbial diversity

7 July 2018

1 reference

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Prokaryotes: the unseen majority

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3660670

Comparison of phenotypic diversity and DNA heterogeneity in a population of soil bacteria

7 July 2018

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Santa Rosalia revisited: why are there so many species of bacteria?

7 July 2018

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Diversity and Evenness: A Unifying Notation and Its Consequences

21 January 2018

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A Mathematical Theory of Communication

21 January 2018

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21 January 2018

Measurement of Diversity

1 reference

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Denaturing gradient electrophoresis (DGE) and single-strand conformation polymorphism (SSCP) molecular fingerprintings revisited by simulation and used as a tool to measure microbial diversity

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23407313

12 December 2020

inferred from PubMed ID database lookup

ESTIMATING SPECIES RICHNESS: SENSITIVITY TO SAMPLE COVERAGE AND INSENSITIVITY TO SPATIAL PATTERNS

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.10

7 January 2021

INTERPOLATING, EXTRAPOLATING, AND COMPARING INCIDENCE-BASED SPECIES ACCUMULATION CURVES

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.10

7 January 2021

Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.10

7 January 2021

Entropy and diversity

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.10

7 January 2021

Identifiers

DOI

10.1038/ISMEJ.2013.10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23407313%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

1 reference

Dimensions Publication ID

0 references

1 reference

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23 February 2020

PubMed publication ID

23407313

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23407313%20AND%20SRC:MED&resulttype=core&format=json