Plant genome evolution: lessons from comparative genomics at the DNA level (Q34541395)

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English	Plant genome evolution: lessons from comparative genomics at the DNA level	scientific article

Statements

instance of

scholarly article

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Europe PubMed Central

PubMed publication ID

11860210

retrieved

2 August 2017

review article

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Europe PubMed Central

title

Plant genome evolution: lessons from comparative genomics at the DNA level (English)

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stated in

Europe PubMed Central

PubMed publication ID

11860210

retrieved

2 August 2017

main subject

comparative genomics

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based on heuristic

inferred from title

author name string

Renate Schmidt

series ordinal

1

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Europe PubMed Central

PubMed publication ID

11860210

retrieved

2 August 2017

publication date

1 January 2002

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stated in

Europe PubMed Central

PubMed publication ID

11860210

retrieved

2 August 2017

published in

Plant Molecular Biology

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stated in

Europe PubMed Central

PubMed publication ID

11860210

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2 August 2017

volume

48

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stated in

Europe PubMed Central

PubMed publication ID

11860210

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2 August 2017

issue

1-2

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Europe PubMed Central

PubMed publication ID

11860210

retrieved

2 August 2017

page(s)

21-37

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Europe PubMed Central

PubMed publication ID

11860210

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2 August 2017

cites work

Genome relationships: the grass model in current research

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Evaluation of gene prediction software using a genomic data set: application to Arabidopsis thaliana sequences

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Pronounced intraspecific haplotype divergence at the RPP5 complex disease resistance locus of Arabidopsis

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Comparative sequence analysis of plant nuclear genomes:m microcolinearity and its many exceptions

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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The association of flowering time quantitative trait loci with duplicated regions and candidate loci in Brassica oleracea

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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inferred from PubMed ID database lookup

Yesterday's polyploids and the mystery of diploidization

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Alignment of the conserved C genomes of Brassica oleracea and Brassica napus

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Comparative mapping of Arabidopsis thaliana and Brassica oleracea chromosomes reveals islands of conserved organization

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12 December 2020

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Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution

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12 December 2020

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Towards map-based cloning of the barley stem rust resistance genes Rpg1 and rpg4 using rice as an intergenomic cloning vehicle

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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High density molecular linkage maps of the tomato and potato genomes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Synteny: recent advances and future prospects.

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12 December 2020

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Conservation of gene repertoire but not gene order in pepper and tomato

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Arabidopsis-rice: will colinearity allow gene prediction across the eudicot-monocot divide?

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Arabidopsis and Brassica comparative genomics: sequence, structure and gene content in the ABI-Rps2-Ck1 chromosomal segment and related regions

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid reorganization of resistance gene homologues in cereal genomes.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Centromeric sites and cereal chromosome evolution

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Comparative fluorescence in situ hybridization mapping of a 431-kb Arabidopsis thaliana bacterial artificial chromosome contig reveals the role of chromosomal duplications in the expansion of the Brassica rapa genome.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Differentiation between homoeologous chromosomes 1A of wheat and 1Am of Triticum monococcum and its recognition by the wheat Ph1 locus.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Comparative genome analysis reveals extensive conservation of genome organisation for Arabidopsis thaliana and Capsella rubella.

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Grass genomes

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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The complete sequence of 340 kb of DNA around the rice Adh1-adh2 region reveals interrupted colinearity with maize chromosome 4.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Genome organization in dicots: genome duplication in Arabidopsis and synteny between soybean and Arabidopsis

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Comparative genetics in the grasses

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rice-barley synteny and its application to saturation mapping of the barley Rpg1 region.

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PubMed

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12 December 2020

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'Green revolution' genes encode mutant gibberellin response modulators.

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Genetic and physical mapping in Brassica diploid species of a gene cluster defined in Arabidopsis thaliana

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Physical mapping of the barley stem rust resistance gene rpg4.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative mapping of quantitative trait loci sculpting the curd of Brassica oleracea

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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RFLP-based genetic maps of wheat homoeologous group 7 chromosomes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Sequence analysis of a rice BAC covering the syntenous barley Rpg1 region

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Genome mapping in capsicum and the evolution of genome structure in the solanaceae.

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Differential methylation of genes and retrotransposons facilitates shotgun sequencing of the maize genome

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Plant genome values: how much do we know?

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Comparative mapping in Arabidopsis and Brassica, fine scale genome collinearity and congruence of genes controlling flowering time.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Genetic mapping and characterization of sorghum and related crops by means of maize DNA probes

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Sequence organization and conservation in sh2/a1-homologous regions of sorghum and rice.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Physical mapping of duplicated genomic regions of two chromosome ends in rice

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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The use of the Monsanto draft rice genome sequence in research

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene identification in a complex chromosomal continuum by local genomic cross-referencing.

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Linkage arrangement of restriction fragment length polymorphism loci in Brassica oleracea

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative linkage maps of the rice and maize genomes

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Rice bioinformatics. analysis of rice sequence data and leveraging the data to other plant species

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Independent deletions of a pathogen-resistance gene in Brassica and Arabidopsis

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Identification of the genomic locations of duplicate nucleotide sequences in maize by analysis of restriction fragment length polymorphisms.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microcolinearity in sh2-homologous regions of the maize, rice, and sorghum genomes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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The origins of genomic duplications in Arabidopsis.

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12 December 2020

based on heuristic

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Identification of the A and C genomes of amphidiploid Brassica napus (oilseed rape)

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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An EST-enriched comparative map of Brassica oleracea and Arabidopsis thaliana

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Convergent domestication of cereal crops by independent mutations at corresponding genetic Loci

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12 December 2020

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Amphidiploid Brassica juncea contains conserved progenitor genomes

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12 December 2020

based on heuristic

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Comparative physical mapping of segments of the genome of Brassica oleracea var. alboglabra that are homoeologous to sequenced regions of chromosomes 4 and 5 of Arabidopsis thaliana

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12 December 2020

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RFLP Maps Based on a Common Set of Clones Reveal Modes of Chromosomal Evolution in Potato and Tomato

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12 December 2020

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Angiosperm phylogeny inferred from multiple genes as a tool for comparative biology

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12 December 2020

based on heuristic

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Comparative sequence analysis of colinear barley and rice bacterial artificial chromosomes.

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12 December 2020

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Comparison of Flowering Time Genes in Brassica rapa, B. napus and Arabidopsis thaliana

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12 December 2020

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Organization of an Arabidopsis thaliana gene cluster on chromosome 4 including the RPS2 gene, in the Brassica nigra genome

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12 December 2020

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The evolutionary fate and consequences of duplicate genes

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12 December 2020

based on heuristic

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A linkage map ofBrassica rapa (syn.campestris) based on restriction fragment length polymorphism loci

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PubMed

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12 December 2020

based on heuristic

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Detailed Comparative Mapping of Cereal Chromosome Regions Corresponding to the Ph1 Locus in Wheat

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12 December 2020

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Importance of anchor genomes for any plant genome project.

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12 December 2020

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Was there a single ancestral cereal chromosome?

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12 December 2020

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Comparative genomics of plant chromosomes

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nested retrotransposons in the intergenic regions of the maize genome

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

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12 December 2020

based on heuristic

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Nuclear DNA amounts in angiosperms

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12 December 2020

based on heuristic

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Subgenome chromosome walking in wheat: a 450-kb physical contig in Triticum monococcum L. spans the Lr10 resistance locus in hexaploid wheat (Triticum aestivum L.).

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12 December 2020

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Duplicate and diverge: the evolution of plant genome microstructure

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12 December 2020

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Extensive duplication and reshuffling in the Arabidopsis genome

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12 December 2020

based on heuristic

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Comparative genome mapping in Brassica

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Arabidopsis thaliana: a source of candidate disease-resistance genes for Brassica napus.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Comparative analysis of QTLs affecting plant height and maturity across the Poaceae, in reference to an interspecific sorghum population.

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12 December 2020

based on heuristic

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Comparative mapping of the Brassica S locus region and its homeolog in Arabidopsis. Implications for the evolution of mating systems in the Brassicaceae

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12 December 2020

based on heuristic

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Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny

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12 December 2020

based on heuristic

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Toward integration of comparative genetic, physical, diversity, and cytomolecular maps for grasses and grains, using the sorghum genome as a foundation

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12 December 2020

based on heuristic

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Identification and analysis of homoeologous segments of the genomes of rice and Arabidopsis thaliana

1 reference

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12 December 2020

based on heuristic

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Comparative mapping between Arabidopsis thaliana and Brassica nigra indicates that Brassica genomes have evolved through extensive genome replication accompanied by chromosome fusions and frequent rearrangements

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12 December 2020

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High gene density is conserved at syntenic loci of small and large grass genomes

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12 December 2020

based on heuristic

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Colinearity and its exceptions in orthologous adh regions of maize and sorghum

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12 December 2020

based on heuristic

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Structure and organization of the B genome based on a linkage map in Brassica nigra

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12 December 2020

based on heuristic

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Insights into the structural and functional evolution of plant genomes afforded by the nucleotide sequences of chromosomes 2 and 4 of Arabidopsis thaliana

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12 December 2020

based on heuristic

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Toward a unified genetic map of higher plants, transcending the monocot-dicot divergence

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12 December 2020

based on heuristic

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Collinearity between a 30-centimorgan segment of Arabidopsis thaliana chromosome 4 and duplicated regions within the Brassica napus genome

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11860210

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome evolution in polyploids

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11860210

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative Sequence Analysis Reveals Extensive Microcolinearity in the Lateral Suppressor Regions of the Tomato, Arabidopsis, and Capsella Genomes

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

based on heuristic

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Evidence for an ancient chromosomal duplication in Arabidopsis thaliana by sequencing and analyzing a 400-kb contig at the APETALA2 locus on chromosome 4.

1 reference

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https://pubmed.ncbi.nlm.nih.gov/11860210

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12 December 2020

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Identifiers

DOI

10.1023/A:1013788306201

1 reference

stated in

Europe PubMed Central

PubMed publication ID

11860210

retrieved

2 August 2017

Dimensions Publication ID

1052084777

0 references

PubMed publication ID

11860210

1 reference

stated in

Europe PubMed Central

PubMed publication ID

11860210

retrieved

2 August 2017

 

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