Comparison of deterministic and stochastic models of the lac operon genetic network (Q34374166)

1 August 2017

title

Comparison of deterministic and stochastic models of the lac operon genetic network (English)

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1 August 2017

Michail Stamatakis

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1 August 2017

Nikos V Mantzaris

series ordinal

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1 August 2017

language of work or name

English

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publication date

1 February 2009

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1 August 2017

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inferred from page(s)

published in

Biophysical Journal

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1 August 2017

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1 August 2017

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1 August 2017

page(s)

887-906

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Mathematical description of gene regulatory units

1 August 2017

cites work

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6 July 2018

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ENZYME INDUCTION AS AN ALL-OR-NONE PHENOMENON

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6 July 2018

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Influence of catabolite repression and inducer exclusion on the bistable behavior of the lac operon

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Feedback regulation in the lactose operon: a mathematical modeling study and comparison with experimental data

6 July 2018

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6 July 2018

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A closer view of the conformation of the Lac repressor bound to operator

6 July 2018

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6 July 2018

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6 July 2018

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Stochastic kinetic analysis of developmental pathway bifurcation in phage lambda-infected Escherichia coli cells

6 July 2018

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Simulation of prokaryotic genetic circuits

6 July 2018

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Stochastic mechanisms in gene expression

6 July 2018

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Genetic studies of the Lac repressor. XV: 4000 single amino acid substitutions and analysis of the resulting phenotypes on the basis of the protein structure

6 July 2018

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Crystal structure of the lactose operon repressor and its complexes with DNA and inducer

6 July 2018

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Quality and position of the three lac operators of E. coli define efficiency of repression.

6 July 2018

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Crystal structure of lac repressor core tetramer and its implications for DNA looping

6 July 2018

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Mechanism of CRP-cAMP activation of lac operon transcription initiation activation of the P1 promoter

6 July 2018

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Mathematics of cellular control processes II. Positive feedback to one gene

6 July 2018

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On the Relation between Effector Concentration and the Rate of Induced Enzyme Synthesis

6 July 2018

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Lac repressor-operator interaction. I. Equilibrium studies

6 July 2018

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Mutants that make more lac repressor

6 July 2018

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Binding of an inducer to the lac repressor

6 July 2018

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6 July 2018

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6 July 2018

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Site-specific mutagenesis of histidine residues in the lac permease of Escherichia coli

6 July 2018

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The three operators of the lac operon cooperate in repression

6 July 2018

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Deletion of lactose repressor carboxyl-terminal domain affects tetramer formation

6 July 2018

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6 July 2018

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Dual control of invertase biosynthesis in chemostat culture

6 July 2018

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Mutations affecting the quaternary structure of the lac repressor.

6 July 2018

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DNA sequence for a low-level promoter of the lac repressor gene and an ‘up’ promoter mutation

6 July 2018

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Binding of synthetic lactose operator DNAs to lactose repressors

6 July 2018

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Modeling the role of cyclic AMP in catabolite repression of inducible enzyme biosynthesis in mircobial cells

6 July 2018

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A kinetic model of catabolite repression in the dual control mechanism in microorganisms

6 July 2018

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Cybernetic modeling of growth in mixed, substitutable substrate environments: Preferential and simultaneous utilization.

6 July 2018

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Structured model of genetic control via the lac promoter in Escherichia coli

27 October 2018

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Ribosomal protein limitations in Escherichia coli under conditions of high translational activity

27 October 2018

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Regulation of lac operon expression in mixed sugar chemostat cultures

27 October 2018

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Genetically structured models for lac promoter-operator function in the chromosome and in multicopy plasmids: Lac promoter function

27 October 2018

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Genetically structured models forlac promoter-operator function in the Escherichia coli chromosome and in multicopy plasmids: Lac operator function.

27 October 2018

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Effect of DNA looping on the induction kinetics of the lac operon

27 October 2018

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Multistability in the lactose utilization network of Escherichia coli

27 October 2018

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Glycine insertion in the hinge region of lactose repressor protein alters DNA binding.

27 October 2018

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Mechanistic Modeling of Prokaryotic mRNA Decay

27 October 2018

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Mathematical model of the lac operon: inducer exclusion, catabolite repression, and diauxic growth on glucose and lactose.

27 October 2018

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Wild-type operator binding and altered cooperativity for inducer binding of lac repressor dimer mutant R3.

27 October 2018

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Construction of a dimeric repressor: dissection of subunit interfaces in Lac repressor.

27 October 2018

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Genetic studies of the lac repressor. XIV. Analysis of 4000 altered Escherichia coli lac repressors reveals essential and non-essential residues, as well as "spacers" which do not require a specific sequence.

27 October 2018

1 reference

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Equilibrium binding of inducer to lac repressor.operator DNA complex.

27 October 2018

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DNA sequence alteration resulting from a mutation impairing promoter function in the lac repressor gene

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996131

Kinetic studies of inducer binding to lac repressor.operator complex

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19186128

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Kinetic studies on galactoside permease of Escherichia coli

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19186128

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Complex growth dynamics in batch cultures: experiments and cybernetic models

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19186128

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.BPJ.2008.10.028

1 reference

1 August 2017

1 reference

1 August 2017

1 reference