Structural requirements for enzymatic formation of threonylcarbamoyladenosine (t6A) in tRNA: an in vivo study with Xenopus laevis oocytes (Q34361243)

1 August 2017

title

Structural requirements for enzymatic formation of threonylcarbamoyladenosine (t6A) in tRNA: an in vivo study with Xenopus laevis oocytes (English)

1 reference

1 August 2017

0 references

Xenopus laevis oocyte

1 reference

A. Morin

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9436905

3 December 2024

S. Auxilien

1 reference

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3 December 2024

B. Senger

1 reference

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3 December 2024

R. Tewari

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9436905

3 December 2024

H. Grosjean

1 reference

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3 December 2024

language of work or name

English

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publication date

1 January 1998

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1 August 2017

January 1998

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National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=9436905

full work available at URL

3 December 2024

http://www.rnajournal.org/cgi/content/abstract/4/1/24

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9436905

https://europepmc.org/articles/PMC1369593

3 December 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9436905

https://europepmc.org/articles/PMC1369593?pdf=render

3 December 2024

file format

Portable Document Format

online access status

open access

content deliverer

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9436905

3 December 2024

1 reference

1 August 2017

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1 August 2017

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1 August 2017

page(s)

24-37

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A model for the tertiary structure of mammalian mitochondrial transfer RNAs lacking the entire 'dihydrouridine' loop and stem

1 August 2017

cites work

1 reference

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Transfer RNA recognition by the Escherichia coli delta2-isopentenyl-pyrophosphate:tRNA delta2-isopentenyl transferase: dependence on the anticodon arm structure

6 July 2018

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On the conformation of the anticodon loops of initiator and elongator methionine tRNAs

6 July 2018

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Yeast tRNA(Met) recognition by methionyl-tRNA synthetase requires determinants from the primary, secondary and tertiary structure: a review

6 July 2018

1 reference

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Very fast identification of RNA motifs in genomic DNA. Application to tRNA search in the yeast genome

6 July 2018

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Mechanism, specificity and general properties of the yeast enzyme catalysing the formation of inosine 34 in the anticodon of transfer RNA.

6 July 2018

1 reference

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Compilation of tRNA sequences and sequences of tRNA genes

6 July 2018

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Enzymatic formation of modified nucleosides in tRNA: dependence on tRNA architecture

6 July 2018

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A correlation between N2-dimethylguanosine presence and alternate tRNA conformers

6 July 2018

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Reproducing the three-dimensional structure of a tRNA molecule from structural constraints.

6 July 2018

1 reference

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Intron-dependent formation of pseudouridines in the anticodon of Saccharomyces cerevisiae minor tRNA(Ile).

6 July 2018

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Enzymatic formation of N2,N2-dimethylguanosine in eukaryotic tRNA: importance of the tRNA architecture.

6 July 2018

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Genetic dissection of synthesis and function of modified nucleosides in bacterial transfer RNA.

6 July 2018

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Higher-order structure of bovine mitochondrial tRNA(SerUGA): chemical modification and computer modeling.

6 July 2018

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Summary: the modified nucleosides of RNA.

6 July 2018

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Sequence and organization of the human mitochondrial genome

6 July 2018

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The nucleotide sequence of a small (3S) seryl-tRNA (anticodon GCU) from beef heart mitochondria.

6 July 2018

1 reference

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Effect of threonylcarbamoyl modification (t6A) in yeast tRNA Arg III on codon-anticodon and anticodon-anticodon interactions. A thermodynamic and kinetic evaluation

6 July 2018

1 reference

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Sequence specificity of tRNA-modifying enzymes. An analysis of 258 tRNA sequences

6 July 2018

1 reference

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Stable tRNA precursors in HeLa cells

6 July 2018

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Enzymatic conversion of adenosine to inosine in the wobble position of yeast tRNAAsp: the dependence on the anticodon sequence

6 July 2018

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6 July 2018

Structure in tRNA data

1 reference

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The enzymatic synthesis of N-(purin-6-ylcarbamoyl)threonine, an anticodon-adjacent base in transfer ribonucleic acid

6 July 2018

1 reference

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N-(purin-6-ylcarbamoyl)threonine: Biosynthesis in vitro in transfer RNA by an enzyme purified fromEscherichia coli

6 July 2018

1 reference

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Biosynthesis of N-(purin-6-ylcarbamoyl)-l-threonine riboside. Incorporation of l-threonine in vivo into modified nucleoside of transfer ribonucleic acid

6 July 2018

1 reference

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Biosynthesis and specific labeling of N-(purin-6-ylcarbamoyl)threonine of Escherichiacoli transfer RNA

6 July 2018

1 reference

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The primary structure of yeast initiator transfer ribonucleic acid

6 July 2018

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Enzymatic conversion of guanosine 3' adjacent to the anticodon of yeast tRNAPhe to N1-methylguanosine and the wye nucleoside: dependence on the anticodon sequence.

6 July 2018

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Enzymatic 2'-O-methylation of the wobble nucleoside of eukaryotic tRNAPhe: specificity depends on structural elements outside the anticodon loop

6 July 2018

1 reference

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Bizarre tRNAs inferred from DNA sequences of mitochondrial genomes of nematode worms

6 July 2018

1 reference

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Enzymatic formation of queuosine and of glycosyl queuosine in yeast tRNAs microinjected into Xenopus laevis oocytes. The effect of the anticodon loop sequence

6 July 2018

1 reference

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The role of modified purine 64 in initiator/elongator discrimination of tRNA(iMet) from yeast and wheat germ

6 July 2018

1 reference

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Identification and structural characterization of O-beta-ribosyl-(1"----2')-adenosine-5"-phosphate in yeast methionine initiator tRNA.

6 July 2018

1 reference

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Guanosine modifications in runoff transcripts of synthetic transfer RNA-Phe genes microinjected into Xenopus oocytes

6 July 2018

1 reference

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Efficient site-directed mutagenesis using uracil-containing DNA.

6 July 2018

1 reference

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The 3 A crystal structure of yeast initiator tRNA: functional implications in initiator/elongator discrimination

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369593

Xenopus laevis: Practical uses in cell and molecular biology. Solutions and protocols

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369593

The anticodon triplet is not sufficient to confer methionine acceptance to a transfer RNA

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369593

Aminoacylation and micleoside modification of in vitro synthesised transfer RNA

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369593

Biochemical Research on Oogenesis. Nucleotide Sequence of Initiator tRNA from Oocytes and from Somatic Cells of Xenopus laevis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369593

Nucleotide sequence studies of normal and genetically altered glycine transfer ribonucleic acids from Escherichia coli

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369593

Fitting the structurally diverse animal mitochondrial tRNAs(Ser) to common three-dimensional constraints.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369593

Synthesis and maturation of Xenopus laevis methionine tRNA gene transcripts in homologous cell-free extracts

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369593

Translational efficiency of transfer RNA's: uses of an extended anticodon

27 October 2018

1 reference

12 December 2020

Missense and nonsense suppressors derived from a glycine tRNA by nucleotide insertion and deletion in vivo

1 reference

12 December 2020

The in vivo stability, maturation and aminoacylation of anticodon-substituted Escherichia coli initiator methionine tRNAs

1 reference

12 December 2020

The synthesis and functional evaluation of RNA and DNA polymers having the sequence of Escherichia coli tRNA(fMet)

1 reference

12 December 2020

Characterization of a chemically synthesized RNA having the sequence of the yeast initiator tRNA(Met)

1 reference

12 December 2020

The presence of a D-stem but not a T-stem is essential for triggering aminoacylation upon anticodon binding in yeast methionine tRNA

1 reference

12 December 2020

Posttranscriptionally modified nucleosides in transfer RNA: their locations and frequencies

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12 December 2020

Mobilities of modified ribonucleotides on two-dimensional cellulose thin-layer chromatography

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12 December 2020

Structural compensation in atypical mitochondrial tRNAs

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12 December 2020

Identifiers

PMC publication ID

1369593

1 reference

1 August 2017

1 reference