Metabolic regulation analysis of wild-type and arcA mutant Escherichia coli under nitrate conditions using different levels of omics data. (Q34334897)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

title

Metabolic regulation analysis of wild-type and arcA mutant Escherichia coli under nitrate conditions using different levels of omics data (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

1 reference

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Kenji Nakahigashi

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Masaru Tomita

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Kazuyuki Shimizu

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

publication date

1 October 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

volume

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

page(s)

2593-2604

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json

The fermentation pathways of Escherichia coli

7 February 2020

cites work

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Adaptation of Escherichia coli to respiratory conditions: regulation of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Effect of cell growth rate on expression of the anaerobic respiratory pathway operons frdABCD, dmsABC, and narGHJI of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Alternative respiratory pathways of Escherichia coli: energetics and transcriptional regulation in response to electron acceptors

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Large‐scale 13 C‐flux analysis reveals distinct transcriptional control of respiratory and fermentative metabolism in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Aerobic-anaerobic gene regulation in Escherichia coli: control by the ArcAB and Fnr regulons

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

arcA (dye), a global regulatory gene in Escherichia coli mediating repression of enzymes in aerobic pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

A reassessment of the FNR regulon and transcriptomic analysis of the effects of nitrate, nitrite, NarXL, and NarQP as Escherichia coli K12 adapts from aerobic to anaerobic growth

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Effect of oxygen, and ArcA and FNR regulators on the expression of genes related to the electron transfer chain and the TCA cycle in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Impact of global transcriptional regulation by ArcA, ArcB, Cra, Crp, Cya, Fnr, and Mlc on glucose catabolism in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Metabolic engineering in the -omics era: elucidating and modulating regulatory networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Multiple high-throughput analyses monitor the response of E. coli to perturbations

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Integrating multiple 'omics' analysis for microbial biology: application and methodologies

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Metabolic regulation in Escherichia coli in response to culture environments via global regulators

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Stoichiometric modelling of cell metabolism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Fluxome analysis using GC-MS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

13C metabolic flux analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Systematic phenome analysis of Escherichia coli multiple-knockout mutants reveals hidden reactions in central carbon metabolism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Genome-wide analysis of deoxyadenosine methyltransferase-mediated control of gene expression in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Quantitative Metabolome Analysis Using Capillary Electrophoresis Mass Spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Capillary electrophoresis mass spectrometry-based saliva metabolomics identified oral, breast and pancreatic cancer-specific profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Effect of lpdA gene knockout on the metabolism in Escherichia coli based on enzyme activities, intracellular metabolite concentrations and metabolic flux analysis by 13C-labeling experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Correcting mass isotopomer distributions for naturally occurring isotopes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Pyruvate formate-lyase of Escherichia coli: the acetyl-enzyme intermediate

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Effects of limited aeration and of the ArcAB system on intermediary pyruvate catabolism in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Effect of zwf gene knockout on the metabolism of Escherichia coli grown on glucose or acetate

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Coordinate regulation of the Escherichia coli formate dehydrogenase fdnGHI and fdhF genes in response to nitrate, nitrite, and formate: roles for NarL and NarP

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Regulation of narK gene expression in Escherichia coli in response to anaerobiosis, nitrate, iron, and molybdenum

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Transcription activation by remodelling of a nucleoprotein assembly: the role of NarL at the FNR-dependent Escherichia coli nir promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Effect of the global redox sensing/regulation networks on Escherichia coli and metabolic flux distribution based on C-13 labeling experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Nitrate repression of the Escherichia coli pfl operon is mediated by the dual sensors NarQ and NarX and the dual regulators NarL and NarP

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

The glycolytic flux in Escherichia coli is controlled by the demand for ATP.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Oxygen- and growth rate-dependent regulation of Escherichia coli fumarase (FumA, FumB, and FumC) activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC2MB25069A

21 January 2018

Identifiers

DOI

10.1039/C2MB25069A

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22790675%20AND%20SRC:MED&resulttype=core&format=json