Viral diversity and diversification of major non-structural genes vif, vpr, vpu, tat exon 1 and rev exon 1 during primary HIV-1 subtype C infection (Q34270602)

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English	Viral diversity and diversification of major non-structural genes vif, vpr, vpu, tat exon 1 and rev exon 1 during primary HIV-1 subtype C infection	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

1 August 2017

Viral diversity and diversification of major non-structural genes vif, vpr, vpu, tat exon 1 and rev exon 1 during primary HIV-1 subtype C infection (English)

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Europe PubMed Central

PubMed publication ID

1 August 2017

Rosemary Musonda

4

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Rosemary Musonda

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Europe PubMed Central

PubMed publication ID

1 August 2017

6

object named as

M Essex

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Europe PubMed Central

PubMed publication ID

1 August 2017

Berhanu A Gashe

5

object named as

Berhanu A Gashe

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Europe PubMed Central

PubMed publication ID

1 August 2017

Raabya Rossenkhan

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Raabya Rossenkhan

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Europe PubMed Central

PubMed publication ID

1 August 2017

Theresa K Sebunya

3

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Theresa K Sebunya

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

Vladimir Novitsky

2

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Vladimir Novitsky

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Europe PubMed Central

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1 August 2017

language of work or name

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publication date

9 May 2012

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Europe PubMed Central

PubMed publication ID

1 August 2017

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Europe PubMed Central

PubMed publication ID

1 August 2017

7

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Europe PubMed Central

PubMed publication ID

1 August 2017

5

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

e35491

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Europe PubMed Central

PubMed publication ID

1 August 2017

copyright license

Creative Commons Attribution 4.0 International

9 May 2012

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April 2022 Public Data File from Crossref

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Demographic Processes Affect HIV-1 Evolution in Primary Infection before the Onset of Selective Processes

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MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

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6 July 2018

Extended high viremics: a substantial fraction of individuals maintain high plasma viral RNA levels after acute HIV-1 subtype C infection

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6 July 2018

Transmission of single and multiple viral variants in primary HIV-1 subtype C infection

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Dynamic correlation between CTL response and viral load in primary human immunodeficiency virus-1 infected Koreans

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Impaired replication capacity of acute/early viruses in persons who become HIV controllers

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HIV-1 subtype C-infected individuals maintaining high viral load as potential targets for the "test-and-treat" approach to reduce HIV transmission

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Genetic identity, biological phenotype, and evolutionary pathways of transmitted/founder viruses in acute and early HIV-1 infection

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HIV evolution in early infection: selection pressures, patterns of insertion and deletion, and the impact of APOBEC

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Viral load and CD4+ T-cell dynamics in primary HIV-1 subtype C infection.

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Evolution of proviral gp120 over the first year of HIV-1 subtype C infection

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Impaired nuclear import and viral incorporation of Vpr derived from a HIV long-term non-progressor

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HLA class I-driven evolution of human immunodeficiency virus type 1 subtype c proteome: immune escape and viral load

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HIV-1 variation before seroconversion in men who have sex with men: analysis of acute/early HIV infection in the multicenter AIDS cohort study

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Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing

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6 July 2018

Evidence of differential HLA class I-mediated viral evolution in functional and accessory/regulatory genes of HIV-1

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Modeling within-host HIV-1 dynamics and the evolution of drug resistance: trade-offs between viral enzyme function and drug susceptibility

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Vpr and HIV-1 disease progression: R77Q mutation is associated with long-term control of HIV-1 infection in different groups of patients

1 reference

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Full-length genome characterization of HIV type 1 subtype C isolates from two slow-progressing perinatally infected siblings in South Africa

1 reference

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Dynamics of HIV viremia and antibody seroconversion in plasma donors: implications for diagnosis and staging of primary HIV infection

1 reference

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First demonstration of a lack of viral sequence evolution in a nonprogressor, defining replication-incompetent HIV-1 infection

1 reference

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Vpr R77Q is associated with long-term nonprogressive HIV infection and impaired induction of apoptosis

1 reference

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Diversity of the human immunodeficiency virus type 1 (HIV-1) env sequence after vertical transmission in mother-child pairs infected with HIV-1 subtype A.

1 reference

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Intrapatient diversity and its correlation with viral setpoint in human immunodeficiency virus type 1 CRF02_A/G-IbNG infection

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Identification of human immunodeficiency virus type 1 subtype C Gag-, Tat-, Rev-, and Nef-specific elispot-based cytotoxic T-lymphocyte responses for AIDS vaccine design

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Consistent viral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection

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Genetic characterization of accessory genes from human immunodeficiency virus type 1 group O strains

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Diversity of the vif gene of human immunodeficiency virus type 1 in Uganda

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Genotypic and phenotypic characterization of HIV-1 patients with primary infection

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Defective accessory genes in a human immunodeficiency virus type 1-infected long-term survivor lacking recoverable virus

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Infection and Replication of Tat Human Immunodeficiency Viruses: Genetic Analyses of LTR and tat Mutations in Primary and Long-Term Human Lymphoid Cells

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Persistence of attenuated rev genes in a human immunodeficiency virus type 1-infected asymptomatic individual

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Evidence for negative selective pressure in HIV-2 evolution in vivo

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Viral diversity limits immune diversity in asymptomatic phase of HIV infection

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Evidence for CTL-mediated selection of Tat and Rev mutants after the onset of the asymptomatic period during HIV type 1 infection

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Low conservation of functional domains of HIV type 1 vif and vpr genes in infected mothers correlates with lack of vertical transmission

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Molecular characterization of the HIV type 1 subtype C accessory genes vif, vpr, and vpu.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035491

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Molecular and phylogenetic analysis of HIV type 1 vpr sequences of South African strains

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035491

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Characterization and phylogenetic analysis of South African HIV-1 subtype C accessory genes.

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035491

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Homogeneous quasispecies in 16 out of 17 individuals during very early HIV-1 primary infection.

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035491

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Molecular analysis of HIV type 1 vif sequences from Cape Town, South Africa

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Vpr Is Preferentially Targeted by CTL During HIV-1 Infection

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HIV Quasispecies and Resampling

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035491

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Plasma RNA viral load is not associated with intrapatient quasispecies heterogeneity in HIV-1 infection

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Effect of antiretroviral therapy on HIV-1 genetic evolution during acute infection

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12 December 2020

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Detecting hypermutations in viral sequences with an emphasis on G --> A hypermutation

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https://pubmed.ncbi.nlm.nih.gov/22590503

12 December 2020

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An improved method for post-PCR purification for mtDNA sequence analysis

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Commentary: Sifting through the maze of viral and host diversity and HIV/AIDS clinical progression

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Identifiers

10.1371/JOURNAL.PONE.0035491

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

2012PLoSO...735491R

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PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

ResearchGate publication ID

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