Topographic studies of the GroEL-GroES chaperonin complex by chemical cross-linking using diformyl ethynylbenzene: the power of high resolution electron transfer dissociation for determination of both peptide sequences and their attachment sites (Q34193686)

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English	Topographic studies of the GroEL-GroES chaperonin complex by chemical cross-linking using diformyl ethynylbenzene: the power of high resolution electron transfer dissociation for determination of both peptide sequences and their attachment sites	scientific article

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scholarly article

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20813910%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Topographic studies of the GroEL-GroES chaperonin complex by chemical cross-linking using diformyl ethynylbenzene: the power of high resolution electron transfer dissociation for determination of both peptide sequences and their attachment sites (English)

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20813910%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Michael J. Trnka

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20813910%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

author name string

A L Burlingame

2

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13 February 2020

publication date

2 September 2010

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13 February 2020

Molecular & Cellular Proteomics

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13 February 2020

9

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13 February 2020

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13 February 2020

2306-2317

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PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20813910%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Development of a Novel Cross-linking Strategy for Fast and Accurate Identification of Cross-linked Peptides of Protein Complexes

1 reference

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5 July 2018

An isotopically coded CID-cleavable biotinylated cross-linker for structural proteomics

1 reference

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5 July 2018

Improving software performance for peptide electron transfer dissociation data analysis by implementation of charge state- and sequence-dependent scoring

1 reference

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5 July 2018

A new cross-linking strategy: protein interaction reporter (PIR) technology for protein-protein interaction studies

1 reference

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5 July 2018

Selective enrichment and identification of azide-tagged cross-linked peptides using chemical ligation and mass spectrometry

1 reference

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5 July 2018

A photocleavable and mass spectrometry identifiable cross-linker for protein interaction studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

Systematic analysis of human protein complexes identifies chromosome segregation proteins

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5 July 2018

Probing native protein structures by chemical cross-linking, mass spectrometry, and bioinformatics

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5 July 2018

Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry

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5 July 2018

Cell signaling in space and time: where proteins come together and when they're apart

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

GroEL/GroES cycling: ATP binds to an open ring before substrate protein favoring protein binding and production of the native state

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

Finding chimeras: a bioinformatics strategy for identification of cross-linked peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

Nonprotein based enrichment method to analyze peptide cross-linking in protein complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

Ionic reagent for controlling the gas-phase fragmentation reactions of cross-linked peptides.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

Identification of cross-linked peptides after click-based enrichment using sequential collision-induced dissociation and electron transfer dissociation tandem mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

Selective enrichment of azide-containing peptides from complex mixtures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

Identification of protein-protein interactions and topologies in living cells with chemical cross-linking and mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

Mass spectrometric analysis of cross-linking sites for the structure of proteins and protein complexes.

1 reference

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5 July 2018

Chromogenic cross-linker for the characterization of protein structure by infrared multiphoton dissociation mass spectrometry.

1 reference

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5 July 2018

Identification of cross-linked peptides from large sequence databases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

Reaching for high-hanging fruit in drug discovery at protein-protein interfaces

1 reference

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5 July 2018

The molecular sociology of the cell

1 reference

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5 July 2018

Chaperonin GroEL: structure and reaction cycle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

Informatics strategies for large-scale novel cross-linking analysis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

Performance characteristics of electron transfer dissociation mass spectrometry

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2953922

5 July 2018

Large-scale mapping of human protein-protein interactions by mass spectrometry

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5 July 2018

Protein cross-linking analysis using mass spectrometry, isotope-coded cross-linkers, and integrated computational data processing

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5 July 2018

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

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5 July 2018

Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions.

1 reference

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5 July 2018

Isotopically coded cleavable cross-linker for studying protein-protein interaction and protein complexes

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5 July 2018

Unraveling the interface of signal recognition particle and its receptor by using chemical cross-linking and tandem mass spectrometry

1 reference

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5 July 2018

Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry

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5 July 2018

Electron-capture dissociation tandem mass spectrometry.

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5 July 2018

Isotopically labeled crosslinking reagents: resolution of mass degeneracy in the identification of crosslinked peptides.

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5 July 2018

Role of the -phosphate of ATP in triggering protein folding by GroEL-GroES: function, structure and energetics

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5 July 2018

MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides.

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5 July 2018

NMR analysis of a 900K GroEL GroES complex

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5 July 2018

Intramolecular cross-linking experiments on cytochrome c and ribonuclease A using an isotope multiplet method.

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5 July 2018

Structure of the 30S ribosomal subunit

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Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution

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The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

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5 July 2018

The crystal structure of the asymmetric GroEL–GroES–(ADP)7 chaperonin complex

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5 July 2018

Isotope-tagged cross-linking reagents. A new tool in mass spectrometric protein interaction analysis

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Isotope-coded and affinity-tagged cross-linking (ICATXL): an efficient strategy to probe protein interaction surfaces

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Collisionally activated dissociation and electron capture dissociation of several mass spectrometry-identifiable chemical cross-linkers

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Tandem mass spectrometry acquisition approaches to enhance identification of protein-protein interactions using low-energy collision-induced dissociative chemical crosslinking reagents

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The Disordered Mobile Loop of GroES Folds into a Defined β-Hairpin upon Binding GroEL

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of cross-linked peptides for protein interaction studies using mass spectrometry and 18O labeling

1 reference

https://pubmed.ncbi.nlm.nih.gov/20813910

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural analysis of GroE chaperonin complexes using chemical cross-linking

1 reference

https://pubmed.ncbi.nlm.nih.gov/20813910

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Preferential cleavage of N-N hydrazone bonds for sequencing bis-arylhydrazone conjugated peptides by electron transfer dissociation

1 reference

https://pubmed.ncbi.nlm.nih.gov/20813910

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/MCP.M110.003764

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20813910%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

PMC publication ID

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Europe PubMed Central

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13 February 2020

PubMed publication ID

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Europe PubMed Central

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13 February 2020

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