Modeling inhomogeneous DNA replication kinetics (Q34193038)

31 July 2017

title

Modeling inhomogeneous DNA replication kinetics (English)

1 reference

31 July 2017

Michel G Gauthier

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31 July 2017

Paolo Norio

series ordinal

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31 July 2017

John Bechhoefer

series ordinal

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31 July 2017

language of work or name

English

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publication date

7 March 2012

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31 July 2017

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31 July 2017

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31 July 2017

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31 July 2017

page(s)

e32053

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Creative Commons Attribution 4.0 International

31 July 2017

start time

7 March 2012

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April 2022 Public Data File from Crossref

copyrighted

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cites work

Modeling genome-wide replication kinetics reveals a mechanism for regulation of replication timing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

The human intra-S checkpoint response to UVC-induced DNA damage

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

A model for the spatiotemporal organization of DNA replication in Saccharomyces cerevisiae.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Cyclin A-Cdk1 regulates the origin firing program in mammalian cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

A model for DNA replication showing how dormant origins safeguard against replication fork failure.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Replication fork movement sets chromatin loop size and origin choice in mammalian cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Stochastic hybrid modeling of DNA replication across a complete genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

A dynamic stochastic model for DNA replication initiation in early embryos

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Global regulation of genome duplication in eukaryotes: an overview from the epifluorescence microscope

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Human gene organization driven by the coordination of replication and transcription.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Replication fork velocities at adjacent replication origins are coordinately modified during DNA replication in human cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Genome-wide characterization of fission yeast DNA replication origins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

DNA replication origin interference increases the spacing between initiation events in human cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Excess Mcm2-7 license dormant origins of replication that can be used under conditions of replicative stress.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Genomic mapping of single-stranded DNA in hydroxyurea-challenged yeasts identifies origins of replication

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

The DNA damage response during DNA replication

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

The requirement of yeast replication origins for pre-replication complex proteins is modulated by transcription

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Chromatin decondensation in S-phase involves recruitment of Cdk2 by Cdc45 and histone H1 phosphorylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Plasticity of DNA replication initiation in Epstein-Barr virus episomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Endogenous DNA double-strand breaks: Production, fidelity of repair, and induction of cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Imaging of single DNA molecule: applications to high-resolution genomic studies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Alignment and Sensitive Detection of DNA by a Moving Interface

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296702

Nucleation and growth in one dimension. I. The generalized Kolmogorov-Johnson-Mehl-Avrami model

5 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

Progressive activation of DNA replication initiation in large domains of the immunoglobulin heavy chain locus during B cell development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

Visualization of DNA replication on individual Epstein-Barr virus episomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

Aphidicolin triggers a block to replication origin firing in Xenopus egg extracts

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

Control of replication origin density and firing time in Xenopus egg extracts: role of a caffeine-sensitive, ATR-dependent checkpoint.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

DNA replication origins fire stochastically in fission yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

Defects and DNA Replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

Reconstructing DNA replication kinetics from small DNA fragments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

How Xenopus laevis embryos replicate reliably: investigating the random-completion problem.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

Kinetics of Phase Change. I General Theory

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

Granulation, Phase Change, and Microstructure Kinetics of Phase Change. III

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

Mathematical modelling of whole chromosome replication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

Replication dynamics of the yeast genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032053

Kinetic model of DNA replication in eukaryotic organisms

21 January 2018

1 reference

12 December 2020

Nucleation and growth in one dimension. II. Application to DNA replication kinetics

1 reference

12 December 2020

HowXenopus LaevisReplicates DNA Reliably even though Its Origins of Replication are Located and Initiated Stochastically

1 reference

12 December 2020

Control of DNA replication by anomalous reaction-diffusion kinetics

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0032053

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DOI

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31 July 2017

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31 July 2017

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