Landscape of next-generation sequencing technologies. (Q34187217)

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2 February 2020

review article

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title

Landscape of next-generation sequencing technologies (English)

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2 February 2020

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2 February 2020

author name string

Thomas P Niedringhaus

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2 February 2020

Denitsa Milanova

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2 February 2020

Michael P Snyder

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2 February 2020

Annelise E Barron

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2 February 2020

language of work or name

English

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publication date

25 May 2011

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2 February 2020

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2 February 2020

volume

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issue

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2 February 2020

page(s)

4327-4341

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Company Profile: Complete Genomics Inc

2 February 2020

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5 July 2018

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5 July 2018

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5 July 2018

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High-resolution human genome structure by single-molecule analysis

5 July 2018

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The mutation spectrum revealed by paired genome sequences from a lung cancer patient

5 July 2018

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Optical recognition of converted DNA nucleotides for single-molecule DNA sequencing using nanopore arrays

5 July 2018

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Direct detection of DNA methylation during single-molecule, real-time sequencing

5 July 2018

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Real-time tRNA transit on single translating ribosomes at codon resolution

5 July 2018

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Analysis of genetic inheritance in a family quartet by whole-genome sequencing

5 July 2018

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Nanopore based sequence specific detection of duplex DNA for genomic profiling.

5 July 2018

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Personalized medicine and genomics: challenges and opportunities in assessing effectiveness, cost-effectiveness, and future research priorities.

5 July 2018

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Sequencing technologies - the next generation

5 July 2018

1 reference

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The B73 Maize Genome: Complexity, Diversity, and Dynamics

5 July 2018

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A single molecule scaffold for the maize genome

5 July 2018

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The physical and genetic framework of the maize B73 genome

5 July 2018

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Detailed analysis of a contiguous 22-Mb region of the maize genome

5 July 2018

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Genomic and personalized medicine: foundations and applications

5 July 2018

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The challenges of sequencing by synthesis

5 July 2018

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Human genome sequencing using unchained base reads on self-assembling DNA nanoarrays

5 July 2018

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Single-molecule bonds characterized by solid-state nanopore force spectroscopy

5 July 2018

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Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

5 July 2018

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Structural optimization for heat detection of DNA thermosequencing platform using finite element analysis

5 July 2018

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5 July 2018

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Partial sequencing of a single DNA molecule with a scanning tunnelling microscope

5 July 2018

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Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding

5 July 2018

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Multiplex padlock targeted sequencing reveals human hypermutable CpG variations

5 July 2018

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A single-molecule barcoding system using nanoslits for DNA analysis : nanocoding

5 July 2018

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Next-generation DNA sequencing techniques

5 July 2018

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Continuous base identification for single-molecule nanopore DNA sequencing

5 July 2018

1 reference

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Advantages and limitations of next-generation sequencing technologies: a comparison of electrophoresis and non-electrophoresis methods

5 July 2018

1 reference

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Real-time DNA sequencing from single polymerase molecules

5 July 2018

1 reference

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DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome

5 July 2018

1 reference

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The diploid genome sequence of an Asian individual

5 July 2018

1 reference

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Accurate whole human genome sequencing using reversible terminator chemistry

5 July 2018

1 reference

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The potential and challenges of nanopore sequencing

5 July 2018

1 reference

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Next-generation DNA sequencing

5 July 2018

1 reference

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Nonexponential kinetics of DNA escape from alpha-hemolysin nanopores

5 July 2018

1 reference

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Long, processive enzymatic DNA synthesis using 100% dye-labeled terminal phosphate-linked nucleotides

5 July 2018

1 reference

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Parallel confocal detection of single molecules in real time

5 July 2018

1 reference

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Mapping and sequencing of structural variation from eight human genomes

5 July 2018

1 reference

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The complete genome of an individual by massively parallel DNA sequencing

5 July 2018

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Selective aluminum passivation for targeted immobilization of single DNA polymerase molecules in zero-mode waveguide nanostructures

5 July 2018

1 reference

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A second generation human haplotype map of over 3.1 million SNPs

5 July 2018

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Validation of rice genome sequence by optical mapping

5 July 2018

1 reference

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Multi-nanopore force spectroscopy for DNA analysis

5 July 2018

1 reference

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Sequencing single molecules of DNA.

5 July 2018

1 reference

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An algorithm for assembly of ordered restriction maps from single DNA molecules

5 July 2018

1 reference

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The complete genome sequence of a chronic atrophic gastritis Helicobacter pylori strain: evolution during disease progression

5 July 2018

1 reference

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Zero mode waveguides for single-molecule spectroscopy on lipid membranes

5 July 2018

1 reference

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Toward single molecule DNA sequencing: direct identification of ribonucleoside and deoxyribonucleoside 5'-monophosphates by using an engineered protein nanopore equipped with a molecular adapter

5 July 2018

1 reference

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Prospects for personalized cardiovascular medicine: the impact of genomics

5 July 2018

1 reference

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Detecting single stranded DNA with a solid state nanopore

5 July 2018

1 reference

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Accurate multiplex polony sequencing of an evolved bacterial genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Genome sequencing in microfabricated high-density picolitre reactors

5 July 2018

1 reference

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lambda-Repressor oligomerization kinetics at high concentrations using fluorescence correlation spectroscopy in zero-mode waveguides

5 July 2018

1 reference

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Single-molecule approach to bacterial genomic comparisons via optical mapping

5 July 2018

1 reference

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The Genome of the Diatom Thalassiosira Pseudonana: Ecology, Evolution, and Metabolism

5 July 2018

1 reference

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DNA molecules and configurations in a solid-state nanopore microscope

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Zero-Mode Waveguides for Single-Molecule Analysis at High Concentrations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Characterization of nucleic acids by nanopore analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

A review of DNA sequencing techniques.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Sequence-specific detection of individual DNA strands using engineered nanopores.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Initial sequencing and analysis of the human genome

5 July 2018

1 reference

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The Sequence of the Human Genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Whole-genome shotgun optical mapping of Deinococcus radiodurans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

A sequencing method based on real-time pyrophosphate

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Characterization of individual polynucleotide molecules using a membrane channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Real-time DNA sequencing using detection of pyrophosphate release

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

DNA sequence determination by hybridization: a strategy for efficient large-scale sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

A new method of sequencing DNA.

5 July 2018

1 reference

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Sequencing of megabase plus DNA by hybridization: theory of the method

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

DNA sequencing by hybridization: 100 bases read by a non-gel-based method

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Sequencing by hybridization: towards an automated sequencing of one million M13 clones arrayed on membranes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Nucleotide sequence of bacteriophage φX174 DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

DNA sequencing with chain-terminating inhibitors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

A new method for sequencing DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

DNA sequencing by the dideoxy method.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Protein nanopores with covalently attached molecular adapters

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Progress toward ultrafast DNA sequencing using solid-state nanopores

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Alignment of optical maps.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Electronic signature of DNA nucleotides via transverse transport

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Long-read pyrosequencing using pure 2'-deoxyadenosine-5'-O'-(1-thiotriphosphate) Sp-isomer

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Solid Phase DNA Minisequencing by an Enzymatic Luminometric Inorganic Pyrophosphate Detection Assay

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Combinatorial Sequencing-by-Hybridization: Analysis of the NF1 Gene

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437308

Enzymatic method for continuous monitoring of DNA polymerase activity

28 October 2018

1 reference

12 December 2020

Enhancement of single-molecule fluorescence detection in subwavelength apertures

1 reference

12 December 2020

Accurate sequencing by hybridization for DNA diagnostics and individual genomics

1 reference

12 December 2020

DNA translocation through graphene nanopores

1 reference

12 December 2020

Single molecule measurements of DNA transport through a nanopore

1 reference

12 December 2020

Base-By-Base Ratcheting of Single Stranded DNA through a Solid-State Nanopore

1 reference

12 December 2020

Field enhancement in single subwavelength apertures

1 reference

12 December 2020

Unzipping kinetics of double-stranded DNA in a nanopore

1 reference

12 December 2020

Single protein pores containing molecular adapters at high temperatures

1 reference

12 December 2020

Identifiers

DOI

10.1021/AC2010857

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21612267%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21612267%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

PubMed publication ID

21612267

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21612267%20AND%20SRC:MED&resulttype=core&format=json