Prediction of hybridization and melting for double-stranded nucleic acids (Q34186238)

31 July 2017

title

Prediction of hybridization and melting for double-stranded nucleic acids (English)

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31 July 2017

Roumen A Dimitrov

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31 July 2017

Michael Zuker

series ordinal

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31 July 2017

language of work or name

English

0 references

publication date

1 July 2004

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31 July 2017

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31 July 2017

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31 July 2017

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31 July 2017

page(s)

215-226

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Sequence alignments in the neighborhood of the optimum with general application to dynamic programming

31 July 2017

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A more unified picture for the thermodynamics of nucleic acid duplex melting: a characterization by calorimetric and volumetric techniques

5 July 2018

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Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

5 July 2018

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Predicting sequence-dependent melting stability of short duplex DNA oligomers

5 July 2018

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A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics

5 July 2018

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5 July 2018

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Solvent effects on the kinetics and thermodynamics of stacking in poly(cytidylic acid)

5 July 2018

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A 300 MHz proton nuclear magnetic resonance investigation of deoxyribonucleic acid restriction fragments: dynamic properties

5 July 2018

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Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information

5 July 2018

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Thermodynamics of oligo (A) N -2poly(U) from the dependence of the temperature of the helix-coil transition on oligomer concentration.

5 July 2018

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Free energy of imperfect nucleic acid helices. II. Small hairpin loops

5 July 2018

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Stability of ribonucleic acid double-stranded helices

5 July 2018

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Recursion relation generation of probability profiles for specific-sequence macromolecules with long-range correlations.

5 July 2018

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Solvent effects on the stability of A7U7p.

5 July 2018

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5 July 2018

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Effects of base sequence on the loop folding in DNA hairpins

5 July 2018

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Absorbance melting curves of RNA.

5 July 2018

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Computer prediction of RNA structure

5 July 2018

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On finding all suboptimal foldings of an RNA molecule

5 July 2018

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Thermodynamic stability of the 5' dangling-ended DNA hairpins formed from sequences 5'-(XY)2GGATAC(T)4GTATCC-3', where X, Y = A, T, G, C.

5 July 2018

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Thermodynamic characterization of deoxyribooligonucleotide duplexes containing bulges.

5 July 2018

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The equilibrium partition function and base pair binding probabilities for RNA secondary structure

5 July 2018

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5 July 2018

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Calorimetric and spectroscopic investigation of the helix-to-coil transition of a ribo-oligonucleotide: rA7U7

5 July 2018

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5 July 2018

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Immobilized RNA switches for the analysis of complex chemical and biological mixtures

5 July 2018

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Influence of the oxidatively damaged adduct 8-oxodeoxyguanosine on the conformation, energetics, and thermodynamic stability of a DNA duplex.

28 October 2018

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Theory of the Effects of Concentration and Chain Length on Helix—Coil Equilibria in Two-Stranded Nucleic Acids

28 October 2018

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12 December 2020

Thermodynamics of (dG-dC)3 double-helix formation in water and deuterium oxide

1 reference

12 December 2020

Enthalpy and heat capacity changes for formation of an oligomeric DNA duplex: interpretation in terms of coupled processes of formation and association of single-stranded helices

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12 December 2020

Base-stacking and base-pairing contributions to helix stability: thermodynamics of double-helix formation with CCGG, CCGGp, CCGGAp, ACCGGp, CCGGUp, and ACCGGUp

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12 December 2020

Sequence dependence for the energetics of dangling ends and terminal base pairs in ribonucleic acid

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12 December 2020

Differential hydration of dA.dT base pairing and dA and dT bulges in deoxyoligonucleotides

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12 December 2020

Thermodynamics and NMR of Internal G·T Mismatches in DNA

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12 December 2020

Contributions of dangling end stacking and terminal base-pair formation to the stabilities of XGGCCp, XCCGGp, XGGCCYp, and XCCGGYp helixes

1 reference

12 December 2020

10.1529/BIOPHYSJ.103.020743

Identifiers

DOI

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release_oeeovbjxune6zcy6uiqvcqe7bm

31 July 2017

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/oeeovbjxune6zcy6uiqvcqe7bm

24 November 2022

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PMC publication ID

1304344

1 reference

31 July 2017

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