Transcriptomics of a giant freshwater prawn (Macrobrachium rosenbergii): de novo assembly, annotation and marker discovery. (Q34102915)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22174756%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

title

Transcriptomics of a giant freshwater prawn (Macrobrachium rosenbergii): de novo assembly, annotation and marker discovery (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22174756%20AND%20SRC:MED&resulttype=core&format=json

Macrobrachium rosenbergii

18 January 2020

main subject

fresh water

0 references

0 references

0 references

1 reference

1 reference

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18 January 2020

David A Hurwood

1 reference

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18 January 2020

Hyungtaek Jung

1 reference

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18 January 2020

Russell E Lyons

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22174756%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

Hung Dinh

series ordinal

1 reference

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18 January 2020

Peter B Mather

series ordinal

1 reference

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18 January 2020

language of work or name

English

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publication date

8 December 2011

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18 January 2020

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18 January 2020

volume

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18 January 2020

issue

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18 January 2020

page(s)

e27938

1 reference

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Creative Commons Attribution 4.0 International

18 January 2020

start time

8 December 2011

1 reference

April 2022 Public Data File from Crossref

copyrighted

0 references

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Development of microsatellite markers from an enriched genomic library for the genetic analysis of the Malaysian giant freshwater prawn, Macrobrachium rosenbergii

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Rapidly developing functional genomics in ecological model systems via 454 transcriptome sequencing

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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A key gene of the RNA interference pathway in the black tiger shrimp, Penaeus monodon: identification and functional characterisation of Dicer-1.

5 July 2018

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5 July 2018

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The Gene Ontology project in 2008

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Penaeus monodon gene discovery project: the generation of an EST collection and establishment of a database

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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High phosphorylation efficiency and depression of uncoupled respiration in mitochondria under hypoxia.

5 July 2018

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DNA recognition by Cys2His2 zinc finger proteins

5 July 2018

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Gene ontology: tool for the unification of biology

5 July 2018

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The LIM domain: regulation by association

5 July 2018

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5 July 2018

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The origin of prokaryotic C2H2 zinc finger regulators

5 July 2018

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Primer3 on the WWW for general users and for biologist programmers

5 July 2018

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The WD repeat: a common architecture for diverse functions

5 July 2018

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Integrin-mediated cell adhesion: the cytoskeletal connection

5 July 2018

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Plant O-methyltransferases: molecular analysis, common signature and classification.

5 July 2018

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5 July 2018

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5 July 2018

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The small nuclear GTPase Ran: how much does it run?

5 July 2018

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Molecular diversity of myofibrillar proteins: gene regulation and functional significance

5 July 2018

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Mammalian calponin. Identification and expression of genetic variants

5 July 2018

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Type 2X-myosin heavy chain is coded by a muscle fiber type-specific and developmentally regulated gene

5 July 2018

1 reference

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Cloning and sequencing of cDNAs encoding the actin cross-linking protein transgelin defines a new family of actin-associated proteins

5 July 2018

1 reference

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Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA 1

5 July 2018

1 reference

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The intron-containing gene for yeast profilin (PFY) encodes a vital function

5 July 2018

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Lipid transport function of lipoproteins in flying insects

5 July 2018

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The GTPase superfamily: a conserved switch for diverse cell functions

5 July 2018

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The primary structure of skeletal muscle myosin heavy chain: I. Sequence of the amino-terminal 23 kDa fragment

5 July 2018

1 reference

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The GTPase superfamily: conserved structure and molecular mechanism

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234237

Structure and function of actin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234237

Characterization of AFLP markers associated with growth in the Kuruma prawn, Marsupenaeus japonicus, and identification of a candidate gene.

5 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Actin gene in prawn, Macrobrachium rosenbergii: characteristics and differential tissue expression during embryonic development

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Metabolic pathways implicated in the kinetic impairment of muscle glutamine homeostasis in adult and old glucocorticoid-treated rats

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Prenatally induced changes in muscle structure and metabolic function facilitate exercise-induced obesity prevention.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Quantitative 1H nuclear magnetic resonance metabolite profiling as a functional genomics platform to investigate alkaloid biosynthesis in opium poppy

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

NANOS-3 and FBF proteins physically interact to control the sperm-oocyte switch in Caenorhabditis elegans

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Crystal structure of the nuclear Ras-related protein Ran in its GDP-bound form.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Fiber polymorphism in skeletal muscles of the American lobster, Homarus americanus: continuum between slow-twitch (S1) and slow-tonic (S2) fibers

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Eyestalk ablation has little effect on actin and myosin heavy chain gene expression in adult lobster skeletal muscles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Skeletal muscle fiber types in the ghost crab, Ocypode quadrata: implications for running performance

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Calponin, caldesmon, and chromatophores: The smooth muscle connection

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Structure and expression of a smooth muscle cell-specific gene, SM22 alpha

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Roles of the C. elegans cyclophilin-like protein MOG-6 in MEP-1 binding and germline fates

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Developmental changes of FABP concentration, expression, and intracellular distribution in locust flight muscle.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Positional candidate gene analysis of Lim domain homeobox gene (Isl-1) on chromosome 5q11-q13 in a French morbidly obese population suggests indication for association with type 2 diabetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Identification and characterization of methyl farnesoate binding proteins from the crab, Cancer magister

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Comparative immunohistochemistry and cellular distribution of farnesoic acid O-methyltransferase in the shrimp and the crayfish

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Characterization of the putative farnesoic acid O-methyltransferase (LvFAMeT) cDNA from white shrimp, Litopenaeus vannamei: Evidence for its role in molting.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Profilin and actin-related proteins regulate microfilament dynamics during early mammalian embryogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Dictyostelium amoebae that lack G-actin-sequestering profilins show defects in F-actin content, cytokinesis, and development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Development of type I genetic markers from expressed sequence tags in highly polymorphic species

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Genomic DNA sequence comparison between two inbred soybean cyst nematode biotypes facilitated by massively parallel 454 micro-bead sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Quantification of myosin heavy chain mRNA in somatic and branchial arch muscles using competitive PCR.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234237

Profilin mutations disrupt multiple actin-dependent processes during Drosophila development.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234237

SNPs in ecology, evolution and conservation

28 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0027938

Isolation and expression analysis of multiple isoforms of putative farnesoic acid O-methyltransferase in several crustacean species

21 January 2018

1 reference

12 December 2020

Methyl farnesoate in the prawn Macrobrachium rosenbergii: Synthesis by the mandibular organ in vitro, and titers in the hemolymph

1 reference

12 December 2020

Characterization of Argonaute cDNA from Penaeus monodon and implication of its role in RNA interference

1 reference

12 December 2020

Genetic origin of diversity of human cytoskeletal tropomyosins

1 reference

12 December 2020

Complete mitochondrial DNA sequences of the decapod crustaceans Pseudocarcinus gigas (Menippidae) and Macrobrachium rosenbergii (Palaemonidae)

1 reference

12 December 2020

Short technical reports. Modification of the TRI reagent procedure for isolation of RNA from polysaccharide- and proteoglycan-rich sources

1 reference

12 December 2020

RNA binding motif (RBM) proteins: a novel family of apoptosis modulators?

1 reference

12 December 2020

Distribution of profilin in fibroblasts correlates with the presence of highly dynamic actin filaments

1 reference

12 December 2020

Huxley's line demarcates extensive genetic divergence between eastern and western forms of the giant freshwater prawn, Macrobrachium rosenbergii

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0027938

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22174756%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

0 references

release_hqc3eyils5havc7w4jhqmbe3yq

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/hqc3eyils5havc7w4jhqmbe3yq

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22174756%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

PubMed publication ID

22174756

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22174756%20AND%20SRC:MED&resulttype=core&format=json