A multi gene sequence-based phylogeny of the Musaceae (banana) family (Q21284083)

19 August 2022

Eva Hřibová

Eva

Hřibová

1 reference

19 August 2022

Miroslav Valárik

Miroslav

Valárik

1 reference

19 August 2022

Pavla Christelová

Pavla

Christelová

1 reference

1031171418

19 August 2022

Edmond De Langhe

series ordinal

author given names

Edmond

author last names

De Langhe

1 reference

1031171418

The ITS1-5.8S-ITS2 sequence region in the Musaceae: structure, diversity and use in molecular phylogeny

19 August 2022

language of work or name

English

0 references

publication date

2011

0 references

published in

BMC Evolutionary Biology

0 references

volume

0 references

issue

0 references

page(s)

103

0 references

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Incomplete taxon sampling is not a problem for phylogenetic inference

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Basic local alignment search tool

19 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

19 March 2017

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

BEAST: Bayesian evolutionary analysis by sampling trees

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

The tortoise and the hare: choosing between noncoding plastome and nuclear Adh sequences for phylogeny reconstruction in a recently diverged plant group

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

The phylogeny and a new classification of the gingers (Zingiberaceae): evidence from molecular data

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Phylogenomics: the beginning of incongruence?

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Genome-scale phylogeny and the detection of systematic biases

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Increased taxon sampling greatly reduces phylogenetic error

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the compositae

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Early Cretaceous lineages of monocot flowering plants

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III

19 March 2017

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-103

Assessment of the Validity of the Sections in Musa (Musaceae) using AFLP

22 April 2017

2 references

https://api.crossref.org/works/10.1186/1471-2148-11-103

22 April 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

A new look at the statistical model identification

12 September 2017

1 reference

https://api.crossref.org/works/10.1186/1471-2148-11-103

Genome-scale approaches to resolving incongruence in molecular phylogenies

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

DAMBE: software package for data analysis in molecular biology and evolution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Ribosomal ITS sequences and plant phylogenetic inference

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

A phylogeny of the chloroplast gene rbcL in the Leguminosae: taxonomic correlations and insights into the evolution of nodulation

7 April 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

12 September 2017

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

Analysis of 142 genes resolves the rapid diversification of the rice genus

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Insights into the Musa genome: syntenic relationships to rice and between Musa species

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

A BAC end view of the Musa acuminata genome

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Better the devil you know? Guidelines for insightful utilization of nrDNA ITS in species-level evolutionary studies in plants

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Generating single-copy nuclear gene data for a recent adaptive radiation

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Tree disagreement: measuring and testing incongruence in phylogenies

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Analysis of genetic diversity and sectional relationships in Musa using AFLP markers

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Taxon sampling, bioinformatics, and phylogenomics

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Unraveling the evolutionary radiation of the families of the Zingiberales using morphological and molecular evidence

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Failure of the ILD to determine data combinability for slow loris phylogeny

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Pre-mRNA splicing in higher plants.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Potential phylogenetic utility of the low-copy nuclear gene pistillata in dicotyledonous plants: comparison to nrDNA ITS and trnL intron in Sphaerocardamum and other Brassicaceae

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Rapid surveying of DNA sequence variation in natural populations

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Phylogeny of Bromelioideae (Bromeliaceae) inferred from nuclear and plastid DNA loci reveals the evolution of the tank habit within the subfamily.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Utility of selected non-coding chloroplast DNA sequences for lineage assessment of Musa interspecific hybrids.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Is sparse taxon sampling a problem for phylogenetic inference?

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3102628

Nuclear genome size and genomic distribution of ribosomal DNA in Musa and Ensete (Musaceae): taxonomic implications

30 May 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

Molecular phylogeny and systematics of the banana family (Musaceae) inferred from multiple nuclear and chloroplast DNA fragments, with a special reference to the genus Musa

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

Phylogeny of Actaea including Cimicifuga (Ranunculaceae) inferred from nrDNA ITS sequence variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

Concerted evolution, molecular drive and natural selection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

The age of major monocot groups inferred from 800+rbcL sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

Botanical Results of the Banana Collecting Expedition, 1954-5.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

A Chloroplast DNA Phylogeny of the Solanaceae: Subfamilial Relationships and Character Evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

21 January 2018

Taxon sampling revisited

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

Taxonomic sampling, phylogenetic accuracy, and investigator bias

21 January 2018

1 reference

12 December 2020

Identification of cytoplasmic ancestor gene-pools of Musa acuminata Colla and Musa balbisiana Colla and their hybrids by chloroplast and mitochondrial haplotyping

1 reference

12 December 2020

Utility of 17 chloroplast genes for inferring the phylogeny of the basal angiosperms

1 reference

12 December 2020

Rings of single-walled carbon nanotubes

1 reference

12 December 2020

Restriction fragment length polymorphism (RFLP)-based phylogenetic analysis of Musa

1 reference

12 December 2020

The elevation history of the Tibetan Plateau and its implications for the Asian monsoon

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

7 January 2021

Testing Significance of Incongruence

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

7 January 2021

Classification of the Bananas: The Genus Musa L.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

7 January 2021

The Evolutionary and Biogeographic Origin and Diversification of the Tropical Monocot Order Zingiberales

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-103

7 January 2021

Identifiers

DOI

10.1186/1471-2148-11-103

0 references

https://scigraph.springernature.com/pub.10.1186/1471-2148-11-103

1 reference

9 September 2019

Fatcat ID

release_gqfkut3s6fer7jztmno5iujfga

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/gqfkut3s6fer7jztmno5iujfga

24 November 2022