Smg5 nonsense mediated mRNA decay factor Dmel_CG8954 (Q29810169)

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Protein found in Drosophila melanogaster

• Smg5
• Smg5-PB
• Smg5-PC
• CG8954-PA
• CG8954-PB
• Smg5-PA
• CG8954 gene product from transcript CG8954-RB
• CG8954-PC
• Smg5 nonsense mediated mRNA decay factor

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Language	Label	Description	Also known as
English	Smg5 nonsense mediated mRNA decay factor Dmel_CG8954	Protein found in Drosophila melanogaster	Smg5 Smg5-PB Smg5-PC CG8954-PA CG8954-PB Smg5-PA CG8954 gene product from transcript CG8954-RB CG8954-PC Smg5 nonsense mediated mRNA decay factor

Statements

instance of

protein

1 reference

stated in

UniProt

retrieved

25 May 2022

UniProt protein ID

Q9V414

part of

Tetratricopeptide-like helical domain superfamily

1 reference

stated in

InterPro Release 71.0

reference URL

http://www.ebi.ac.uk/interpro/protein/Q9V414

DNA/RNA-binding domain, Est1-type, protein family

1 reference

based on heuristic

inferred from protein domain or family

PIN domain, protein family

1 reference

based on heuristic

inferred from protein domain or family

Telomerase activating protein Est1 family

1 reference

based on heuristic

inferred from protein domain or family

found in taxon

Drosophila melanogaster

1 reference

stated in

UniProt

retrieved

25 May 2022

UniProt protein ID

Q9V414

encoded by

Smg5

1 reference

stated in

UniProt

retrieved

25 May 2022

UniProt protein ID

Q9V414

molecular function

ribonuclease activity

determination method or standard

IBA

1 reference

retrieved

10 September 2018

stated in

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

GOA

curator

GO Central

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q9V414&geneProductId=UniProtKB:Q9V414

determination method or standard

IBA

telomeric DNA binding

determination method or standard

IBA

1 reference

retrieved

8 April 2019

stated in

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

GOA

curator

GO Central

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9V414

determination method or standard

IBA

ribonucleoprotein complex binding

determination method or standard

IBA

1 reference

retrieved

10 September 2018

stated in

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

GOA

curator

GO Central

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q9V414&geneProductId=UniProtKB:Q9V414

determination method or standard

IBA

telomerase RNA binding

determination method or standard

IBA

1 reference

retrieved

8 April 2019

stated in

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

GOA

curator

GO Central

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9V414

determination method or standard

IBA

cell component

telomerase holoenzyme complex

determination method or standard

IBA

1 reference

retrieved

8 April 2019

stated in

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

GOA

curator

GO Central

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9V414

determination method or standard

IBA

cytoplasm

determination method or standard

IBA

1 reference

retrieved

8 April 2019

stated in

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

GOA

curator

GO Central

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9V414

determination method or standard

IBA

biological process

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

determination method or standard

IMP

2 references

retrieved

8 April 2019

stated in

Nonsense-mediated mRNA decay in Drosophila: at the intersection of the yeast and mammalian pathways

GOA

curator

FlyBase

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9V414

determination method or standard

IMP

retrieved

8 April 2019

stated in

A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing

GOA

curator

FlyBase

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9V414

determination method or standard

IMP

mRNA export from nucleus

determination method or standard

IBA

1 reference

retrieved

16 July 2018

stated in

GOA

curator

GO Central

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q9V414&geneProductId=UniProtKB:Q9V414

determination method or standard

IBA

telomere maintenance via telomerase

determination method or standard

IBA

1 reference

retrieved

8 April 2019

stated in

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

GOA

curator

GO Central

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9V414

determination method or standard

IBA

RNA interference

determination method or standard

IMP

1 reference

retrieved

8 April 2019

stated in

A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing

GOA

curator

FlyBase

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9V414

determination method or standard

IMP

gene silencing by miRNA

determination method or standard

IMP

1 reference

retrieved

8 April 2019

stated in

A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing

GOA

curator

FlyBase

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9V414

determination method or standard

IMP

regulation of RNA stability

determination method or standard

IBA

1 reference

retrieved

10 September 2018

stated in

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

GOA

curator

GO Central

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q9V414&geneProductId=UniProtKB:Q9V414

determination method or standard

IBA

RNA phosphodiester bond hydrolysis

determination method or standard

IEA

1 reference

retrieved

10 September 2018

stated in

GOA

curator

Gene Ontology Consortium

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q9V414&geneProductId=UniProtKB:Q9V414

determination method or standard

IEA

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

determination method or standard

IBA

IMP

3 references

retrieved

10 September 2018

stated in

A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing

GOA

curator

FlyBase

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q9V414&geneProductId=UniProtKB:Q9V414

determination method or standard

IMP

retrieved

10 September 2018

stated in

Nonsense-mediated mRNA decay in Drosophila: at the intersection of the yeast and mammalian pathways

GOA

curator

FlyBase

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q9V414&geneProductId=UniProtKB:Q9V414

determination method or standard

IMP

retrieved

10 September 2018

stated in

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

GOA

curator

GO Central

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q9V414&geneProductId=UniProtKB:Q9V414

determination method or standard

IBA

regulation of telomere maintenance via telomerase

determination method or standard

IBA

1 reference

retrieved

8 April 2019

stated in

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

GOA

curator

GO Central

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9V414

determination method or standard

IBA

has part(s)

DNA/RNA-binding domain, Est1-type

1 reference

stated in

InterPro Release 71.0

reference URL

http://www.ebi.ac.uk/interpro/protein/Q9V414

Telomerase activating protein Est1

1 reference

stated in

InterPro Release 71.0

reference URL

http://www.ebi.ac.uk/interpro/protein/Q9V414

PIN domain

1 reference

stated in

InterPro Release 71.0

reference URL

http://www.ebi.ac.uk/interpro/protein/Q9V414

Identifiers

RefSeq protein ID

NP_001285914

1 reference

stated in

NCBI Gene

retrieved

20 March 2022

Entrez Gene ID

34804

NP_609685

1 reference

stated in

NCBI Gene

retrieved

20 March 2022

Entrez Gene ID

34804

NP_723851

1 reference

stated in

NCBI Gene

retrieved

20 March 2022

Entrez Gene ID

34804

UniProt protein ID

Q9V414

1 reference

stated in

UniProt

retrieved

25 May 2022

UniProt protein ID

Q9V414

Ensembl protein ID

FBpp0080139

1 reference

stated in

ensembl Release 106

Ensembl protein ID

FBpp0080139

FBpp0310261

1 reference

stated in

ensembl Release 106

Ensembl protein ID

FBpp0310261

FBpp0080138

1 reference

stated in

ensembl Release 106

Ensembl protein ID

FBpp0080138

 

Sitelinks

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Wikibooks(0 entries)

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Wikinews(0 entries)

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Wikiquote(0 entries)

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Wikisource(0 entries)

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Wikiversity(0 entries)

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Wikivoyage(0 entries)

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Wiktionary(0 entries)

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Multilingual sites(0 entries)

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Retrieved from "https://www.wikidata.org/w/index.php?title=Q29810169&oldid=2030257137"