Dfam: a database of repetitive DNA based on profile hidden Markov models (Q28710186)

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scientific article (publication date: 2013)

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Language	Label	Description	Also known as
English	Dfam: a database of repetitive DNA based on profile hidden Markov models	scientific article (publication date: 2013)

Statements

instance of

scholarly article

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title

Dfam: a database of repetitive DNA based on profile hidden Markov models (English)

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main subject

database

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author

Robert D. Finn

series ordinal

8

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Jody Clements

series ordinal

2

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Sean Eddy

object named as

Sean R Eddy

series ordinal

3

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Travis J. Wheeler

series ordinal

1

object named as

Travis J Wheeler

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Robert Hubley

series ordinal

4

object named as

Robert Hubley

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Thomas A. Jones

series ordinal

5

object named as

Thomas A Jones

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Jerzy Jurka

series ordinal

6

object named as

Jerzy Jurka

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Arian F. A. Smit

series ordinal

7

object named as

Arian F A Smit

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language of work or name

English

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publication date

January 2013

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published in

Nucleic Acids Research

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volume

41

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issue

Database issue

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page(s)

D70-82

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copyright license

Creative Commons Attribution-NonCommercial 3.0 Unported

start time

4 October 2016

1 reference

stated in

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

PSI-Search: iterative HOE-reduced profile SSEARCH searching

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531169

retrieved

17 March 2017

Repetitive elements may comprise over two-thirds of the human genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531169

retrieved

17 March 2017

The Pfam protein families database

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531169

retrieved

17 March 2017

Rfam: Wikipedia, clans and the "decimal" release

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531169

retrieved

17 March 2017

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531169

retrieved

17 March 2017

Tandem repeats finder: a program to analyze DNA sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531169

retrieved

17 March 2017

Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531169

retrieved

17 March 2017

Accelerated Profile HMM Searches

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531169

retrieved

7 April 2017

Repbase Update, a database of eukaryotic repetitive elements

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531169

retrieved

7 April 2017

CENSOR--a program for identification and elimination of repetitive elements from DNA sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531169

retrieved

3 June 2018

The Diagram, a Method for Comparing Sequences. Its Use with Amino Acid and Nucleotide Sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531169

retrieved

3 June 2018

Identifiers

DOI

10.1093/NAR/GKS1265

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

841090

DBLP publication ID

journals/nar/WheelerCEHJJSF13

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

OpenCitations bibliographic resource ID

841090

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

841090

PMC publication ID

3531169

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

841090

PubMed publication ID

23203985

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

841090

ResearchGate publication ID

233829945

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Semantic Scholar paper ID

0871bdc31a5c943360eb34bf0a44417f913b1259

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