Assessing signatures of selection through variation in linkage disequilibrium between taurine and indicine cattle (Q28657745)

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8 June 2020

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8 June 2020

1 reference

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8 June 2020

Tad S Sonstegard

1 reference

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8 June 2020

Ana M Pérez O'Brien

1 reference

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8 June 2020

Johann Sölkner

1 reference

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8 June 2020

Gábor Mészáros

1 reference

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8 June 2020

George E Liu

series ordinal

1 reference

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8 June 2020

Marcos V B Da Silva

series ordinal

1 reference

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8 June 2020

José Fernando Garcia

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24592996%20AND%20SRC:MED&resulttype=core&format=json

Genetics Selection Evolution

8 June 2020

language of work or name

English

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publication date

4 March 2014

0 references

published in

1 reference

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8 June 2020

volume

1 reference

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8 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24592996%20AND%20SRC:MED&resulttype=core&format=json

A dual role for UVRAG in maintaining chromosomal stability independent of autophagy

8 June 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

A whole genome Bayesian scan for adaptive genetic divergence in West African cattle

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Genome wide signatures of positive selection: the comparison of independent samples and the identification of regions associated to traits

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Development and characterization of a high density SNP genotyping assay for cattle

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Bif-1 interacts with Beclin 1 through UVRAG and regulates autophagy and tumorigenesis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

PLINK: a tool set for whole-genome association and population-based linkage analyses

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

A map of recent positive selection in the human genome

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Loss-of-function mutations in LEMD3 result in osteopoikilosis, Buschke-Ollendorff syndrome and melorheostosis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

hsp70-DnaJ chaperone pair prevents nitric oxide- and CHOP-induced apoptosis by inhibiting translocation of Bax to mitochondria

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Detecting recent positive selection in the human genome from haplotype structure

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

GenABEL: an R library for genome-wide association analysis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Positive natural selection in the human lineage

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Molecular signatures of natural selection

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Detection of selective sweeps in cattle using genome-wide SNP data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Detecting loci under recent positive selection in dairy and beef cattle by combining different genome-wide scan methods.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Genome-wide detection of selective signature in Chinese Holstein

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Fine mapping of copy number variations on two cattle genome assemblies using high density SNP array

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Tissue-specific temporal exome capture revealed muscle-specific genes and SNPs in Indian buffalo (Bubalus bubalis).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Copy number variation in the genomes of domestic animals

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Copy number variation of individual cattle genomes using next-generation sequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Beef lipids in relation to animal breed and nutrition in Argentina

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Identification of genomic regions associated with phenotypic variation between dog breeds using selection mapping

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Copy-number variation: the balance between gene dosage and expression in Drosophila melanogaster.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Footprints of selection in the ancestral admixture of a New World Creole cattle breed

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Application of site and haplotype-frequency based approaches for detecting selection signatures in cattle.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Identification and characterization of human PCDH10 gene promoter

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Climate change and the characterization, breeding and conservation of animal genetic resources

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Identification of selection signatures in cattle breeds selected for dairy production

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

The evolution of tropical adaptation: comparing taurine and zebu cattle.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

A composite of multiple signals distinguishes causal variants in regions of positive selection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

The genome response to artificial selection: a case study in dairy cattle

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Genome-wide comparisons of variation in linkage disequilibrium

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Methylation of protocadherin 10, a novel tumor suppressor, is associated with poor prognosis in patients with gastric cancer.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Widespread balancing selection and pathogen-driven selection at blood group antigen genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Linkage disequilibrium and persistence of phase in Holstein-Friesian, Jersey and Angus cattle

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Whole genome linkage disequilibrium maps in cattle

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Genetic and haplotypic structure in 14 European and African cattle breeds

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Epistasis between calpain 1 and its inhibitor calpastatin within breeds of cattle

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

A new approach for using genome scans to detect recent positive selection in the human genome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Genomic insights into positive selection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

The hitchhiking effect on linkage disequilibrium between linked neutral loci

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Association of a single nucleotide polymorphism in the calpastatin gene with carcass and meat quality traits of beef cattle

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

LEMD3: the gene responsible for bone density disorders (osteopoikilosis).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Estimation of the inbreeding coefficient through use of genomic data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Haplotype blocks and linkage disequilibrium in the human genome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Patterns of linkage disequilibrium in the human genome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Prion protein and developments in its detection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

Isolation by polymerase chain reaction of a cDNA whose product partially complements the ultraviolet sensitivity of xeroderma pigmentosum group C cells

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

A genome map of divergent artificial selection between Bos taurus dairy cattle and Bos taurus beef cattle.

3 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F1297-9686-46-19

varLD: a program for quantifying variation in linkage disequilibrium patterns between populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1297-9686-46-19

The extent of linkage disequilibrium in a large cattle population of western Africa and its consequences for association studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1297-9686-46-19

Innovations in beef production systems that enhance the nutritional and health value of beef lipids and their relationship with meat quality

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1297-9686-46-19

A genome-wide association study of meat and carcass traits in Australian cattle

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1297-9686-46-19

Effect of single nucleotide polymorphisms of CAPN1 and CAST genes on meat traits in Nellore beef cattle (Bos indicus) and in their crosses with Bos taurus

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1297-9686-46-19

Effects of calpastatin and micro-calpain markers in beef cattle on tenderness traits

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4014805

New Indicators of Beef Sensory Quality Revealed by Expression of Specific Genes

27 November 2018

1 reference

12 December 2020

Effects of polymorphisms in the calpastatin and µ-calpain genes on meat tenderness in 3 French beef breeds1

1 reference

12 December 2020

Functional analysis of muscle gene expression profiles associated with tenderness and intramuscular fat content in pork

1 reference

12 December 2020

Production and processing studies on calpain-system gene markers for tenderness in Brahman cattle: 2. Objective meat quality1

1 reference

12 December 2020

Linkage disequilibrium in finite populations

1 reference

12 December 2020

Identifiers

DOI

10.1186/1297-9686-46-19

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24592996%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

8 June 2020

1029241497

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24592996%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

PubMed publication ID

24592996

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24592996%20AND%20SRC:MED&resulttype=core&format=json