Structural and biochemical characterization of the human cyclophilin family of peptidyl-prolyl isomerases (Q28289498)

GOA release 2020-03-11

Tara L Davis

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Wen Hwa Lee

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Wolfram Tempel

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author name string

John R Walker

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Valérie Campagna-Slater

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Patrick J Finerty

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Ragika Paramanathan

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Galina Bernstein

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Farrell MacKenzie

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Hui Ouyang

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Elan Z Eisenmesser

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Sirano Dhe-Paganon

Creative Commons Attribution 4.0 International

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language of work or name

English

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publication date

27 July 2010

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e1000439

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start time

27 July 2010

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April 2022 Public Data File from Crossref

copyrighted

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cites work

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Active site residues of cyclophilin A are crucial for its signaling activity via CD147

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X-ray structures and analysis of 11 cyclosporin derivatives complexed with cyclophilin A

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The 20kD protein of human [U4/U6.U5] tri-snRNPs is a novel cyclophilin that forms a complex with the U4/U6-specific 60kD and 90kD proteins

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20 March 2017

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Peptidyl-prolyl cis-trans isomerase is the cyclosporin A-binding protein cyclophilin

20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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7 April 2017

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A library of fluorescent peptides for exploring the substrate specificities of prolyl isomerases

7 April 2017

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Solution characterization of the extracellular region of CD147 and its interaction with its enzyme ligand cyclophilin A

29 September 2017

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Isoform-specific inhibition of cyclophilins

29 September 2017

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Mechanism of action of cyclophilin a explored by metadynamics simulations

29 September 2017

1 reference

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The mitochondrial phosphate carrier interacts with cyclophilin D and may play a key role in the permeability transition

29 September 2017

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29 September 2017

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Molecular mechanisms of the phospho-dependent prolyl cis/trans isomerase Pin1.

29 September 2017

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29 September 2017

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Role of HIV-1 Gag domains in viral assembly

29 September 2017

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Enzyme dynamics during catalysis

29 September 2017

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29 September 2017

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29 September 2017

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Peptidyl-prolyl cis-trans isomerases, a superfamily of ubiquitous folding catalysts

29 September 2017

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A new heat-shock gene, ppiD, encodes a peptidyl-prolyl isomerase required for folding of outer membrane proteins in Escherichia coli

29 September 2017

1 reference

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Crystal structure of cyclophilin A complexed with a binding site peptide from the HIV‐1 capsid protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Catalysis of protein folding by parvulin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Active-site residues of cyclophilin A are crucial for its incorporation into human immunodeficiency virus type 1 virions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Crystal structure of cyclophilin A complexed with substrate Ala-Pro suggests a solvent-assisted mechanism of cis-trans isomerization

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Biased probability Monte Carlo conformational searches and electrostatic calculations for peptides and proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

The cyclophilin homolog NinaA functions as a chaperone, forming a stable complex in vivo with its protein target rhodopsin.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

A single Trp121 to Ala121 mutation in human cyclophilin alters cyclosporin A affinity and peptidyl-prolyl isomerase activity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

When worlds collide: immunosuppressants meet protein phosphatases

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Chemistry and Biology of the Immunophilins and Their Immunosuppressive Ligands

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Substrate specificities of the peptidyl prolyl cis-trans isomerase activities of cyclophilin and FK-506 binding protein: evidence for the existence of a family of distinct enzymes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Active site mutants of human cyclophilin A separate peptidyl-prolyl isomerase activity from cyclosporin A binding and calcineurin inhibition

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Identification and characterization of Moca-cyp. A Drosophila melanogaster nuclear cyclophilin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Semiautomated microtiter plate assay for monitoring peptidylprolyl cis/trans isomerase activity in normal and pathological human sera.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Determination of kinetic constants for peptidyl prolyl cis-trans isomerases by an improved spectrophotometric assay

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Human and Escherichia coli cyclophilins: sensitivity to inhibition by the immunosuppressant cyclosporin A correlates with a specific tryptophan residue.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Catalysis of protein folding by cyclophilins from different species

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

A nonessential role for Arg 55 in cyclophilin18 for catalysis of proline isomerization during protein folding

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Human CyP33 binds specifically to mRNA and binding stimulates PPIase activity of hCyP33.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

A molecular dynamics study of Cyclophilin A free and in complex with the Ala-Pro dipeptide

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Cyclophilin A binds to linear peptide motifs containing a consensus that is present in many human proteins

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Enzyme dynamics during catalysis measured by NMR spectroscopy

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

A Protease-Free Assay for Peptidyl Prolylcis/transIsomerases Using Standard Peptide Substrates

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

Kinetic Analysis of Cyclophilin-Catalyzed Prolyl Cis/Trans Isomerization by Dynamic NMR Spectroscopy

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2911226

The X-ray structure of a tetrapeptide bound to the active site of human cyclophilin A

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20676357

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Screening for ligands using a generic and high-throughput light-scattering-based assay

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20676357

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Variations of sequences and amino acid compositions of proteins that sustain their biological functions: An analysis of the cyclophilin family of proteins

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20676357

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PBIO.1000439

1 reference

1 reference

1 reference

PubMed publication ID

20676357

1 reference