Lambda: the local aligner for massive biological data (Q28246715)

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scientific article (publication date: September 2014)

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English	Lambda: the local aligner for massive biological data	scientific article (publication date: September 2014)

Statements

instance of

scholarly article

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title

Lambda: the local aligner for massive biological data (English)

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main subject

computational mathematics

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author

Knut Reinert

series ordinal

3

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author name string

Hannes Hauswedell

series ordinal

1

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Jochen Singer

series ordinal

2

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language of work or name

English

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publication date

1 September 2014

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published in

Bioinformatics

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stated in

PubMed

volume

30

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issue

17

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page(s)

i349-55

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copyright license

Creative Commons Attribution-NonCommercial 3.0 Unported

start time

2 October 2016

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stated in

April 2023 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Characterization of a helical protein designed from first principles

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20 March 2017

Phylogenetic classification of short environmental DNA fragments

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Search and clustering orders of magnitude faster than BLAST

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Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms

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29 September 2017

Life in the dark: metagenomic evidence that a microbial slime community is driven by inorganic nitrogen metabolism

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29 September 2017

Fast and accurate read mapping with approximate seeds and multiple backtracking

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29 September 2017

SANS: high-throughput retrieval of protein sequences allowing 50% mismatches

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29 September 2017

RazerS 3: faster, fully sensitive read mapping

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29 September 2017

A comparative evaluation of sequence classification programs

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29 September 2017

STELLAR: fast and exact local alignments

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29 September 2017

Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw

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29 September 2017

RAPSearch2: a fast and memory-efficient protein similarity search tool for next-generation sequencing data

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29 September 2017

Taxonomic classification of metagenomic shotgun sequences with CARMA3.

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29 September 2017

RAPSearch: a fast protein similarity search tool for short reads

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29 September 2017

MicroRazerS: rapid alignment of small RNA reads

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29 September 2017

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Metagenomics: read length matters

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29 September 2017

Protein database searches using compositionally adjusted substitution matrices

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29 September 2017

Local alignment statistics

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PubMed Central

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29 September 2017

Degeneracy of the information contained in amino acid sequences: Evidence from overlaid genes

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29 September 2017

RazerS--fast read mapping with sensitivity control

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PubMed Central

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2 June 2018

Aligning two sequences within a specified diagonal band

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4147892

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2 June 2018

An improved algorithm for matching biological sequences.

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21 January 2018

A linear space algorithm for computing maximal common subsequences

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21 January 2018

Simplified amino acid alphabets for protein fold recognition and implications for folding.

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21 January 2018

Reduction of protein sequence complexity by residue grouping

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/BIOINFORMATICS/BTU439

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2044325

DBLP publication ID

journals/bioinformatics/HauswedellSR14

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

OpenCitations bibliographic resource ID

2044325

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2044325

PMC publication ID

4147892

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2044325

PubMed publication ID

25161219

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2044325

ResearchGate publication ID

265095571

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